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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G207800.1
TraesCS1A01G207900.1
TraesCS1B01G221500.1
TraesCS1B01G221900.1
TraesCS1D01G211100.1
TraesCS1D01G211200.1
TraesCS3A01G302600.1
TraesCS3B01G333800.1
TraesCS3D01G299200.1
TraesCS6D01G319000.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G68060.1 TraesCS1A01G207800.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1A01G207900.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1B01G221500.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1B01G221900.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1D01G211100.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1D01G211200.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS6D01G319000.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS3A01G302600.1 AT5G61010.1 21798944
AT1G68060.1 TraesCS3B01G333800.1 AT5G61010.1 21798944
AT1G68060.1 TraesCS3D01G299200.1 AT5G61010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G107500.1 Wheat nucleus 98.85 98.85
TraesCS7A01G200700.1 Wheat nucleus 98.52 98.52
HORVU7Hr1G041170.1 Barley nucleus 96.71 94.68
EER89530 Sorghum nucleus 87.97 88.12
Os06t0251700-01 Rice nucleus 87.48 87.34
Zm00001d044724_P001 Maize cytosol 86.0 86.14
Zm00001d037291_P001 Maize nucleus 85.83 85.97
TraesCS6D01G278500.1 Wheat cytosol 80.07 81.14
KRH49658 Soybean cytosol 72.98 72.5
KRH70354 Soybean endoplasmic reticulum 72.65 72.06
TraesCS5D01G000100.1 Wheat cytosol 68.2 71.63
KRH60419 Soybean cytosol, plastid 71.99 70.94
PGSC0003DMT400056068 Potato cytosol 72.49 70.74
Solyc05g017980.2.1 Tomato cytosol 72.49 70.74
VIT_01s0011g05790.t01 Wine grape cytosol 74.14 70.64
KRH41720 Soybean cytosol 71.5 70.45
Solyc01g005330.2.1 Tomato cytosol 72.16 70.42
PGSC0003DMT400051425 Potato cytosol, nucleus, plasma membrane 71.83 69.87
PGSC0003DMT400075913 Potato cytosol 70.18 69.04
Solyc04g008040.2.1 Tomato nucleus 69.85 68.72
CDY04200 Canola plastid 69.85 68.72
CDY07403 Canola nucleus, plastid 69.85 68.61
Bra004053.1-P Field mustard nucleus, plastid 69.85 68.61
TraesCS2D01G554500.1 Wheat cytosol 42.01 68.18
CDX84971 Canola cytosol 69.03 68.13
CDY40783 Canola plastid 68.7 68.03
Bra025859.1-P Field mustard nucleus 50.74 67.99
AT1G14840.1 Thale cress plastid 67.55 67.88
AT1G68060.1 Thale cress nucleus, plastid 69.52 67.85
Bra004279.1-P Field mustard nucleus, plastid 69.85 67.84
CDX96050 Canola nucleus, plastid 69.85 67.84
CDY01879 Canola nucleus 69.19 67.31
CDY27573 Canola nucleus, plastid 69.36 67.25
Bra026800.1-P Field mustard nucleus 66.56 67.22
Bra010978.1-P Field mustard nucleus 67.38 66.94
Bra012493.1-P Field mustard nucleus 67.38 66.72
CDY03865 Canola nucleus 67.55 66.56
CDX81676 Canola plastid 64.91 66.55
CDY51769 Canola nucleus 65.73 66.28
Bra026184.1-P Field mustard nucleus 65.07 66.28
CDY45293 Canola nucleus 65.57 66.22
CDY33736 Canola nucleus 65.73 65.95
Bra032784.1-P Field mustard nucleus 64.58 65.77
CDY36126 Canola nucleus 66.72 65.64
AT2G01750.2 Thale cress nucleus 66.72 64.29
CDY36256 Canola nucleus, plastid 65.73 64.15
Bra024854.1-P Field mustard nucleus, plastid 66.39 63.97
CDY17639 Canola nucleus, plastid 65.24 63.56
AT1G24764.3 Thale cress endoplasmic reticulum, extracellular 69.85 61.18
CDY24415 Canola nucleus 23.23 55.29
TraesCS4D01G244000.1 Wheat nucleus 31.8 36.35
Protein Annotations
EnsemblPlants:TraesCS7D01G204000.1EnsemblPlantsGene:TraesCS7D01G204000GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0007010
GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016043InterPro:MAP70ncoils:Coil
PANTHER:PTHR31246PANTHER:PTHR31246:SF4PFAM:PF07058SEG:segMapMan:35.1:
Description
No Description!
Coordinates
chr7D:-:161844003..161849214
Molecular Weight (calculated)
67864.5 Da
IEP (calculated)
9.337
GRAVY (calculated)
-0.853
Length
607 amino acids
Sequence
(BLAST)
001: MADGGEEGNA AAPRGFSRRR GTVRASLDAD ELMALMHGSD PVRVELTRLE NELRDKEREL GEAHTEMRAL RLSERAREKA VEELTDELER MDEKLKLTEY
101: HLDNKNLEVK KINDEKKAAM AAQFAAEATL RRVHAAQKDD DMPPIEAILA PLEAELKLSR QEIAKLQEDN RALDRLTKQK EAALLEAERT VQIAMAKAAM
201: VDDLQNKNQD LMKQIEICHE ENKILDKLHR QKVAEVEKLS QTVRELEESV LAGGAAANAV RDYQRKVQEM NDERKTLDRE LARAKVTANR VAVVVANEWK
301: DSNDKVMPVK QWLEERRFMQ GEMQQLRDKL AVAERTARSE AQLKEKYQLR LKVLEDGLRG PPSGSSRPPT EGKSFSNGPS RRLSLGGADN MSKVSPNGLL
401: TRRSPSFHSR SSLSSSSSLI LKHAKGTSKS FDGGTRSLDR GKVHGNGSHL LNKSTDAVKD REANDGWKGT VDEGTNESPN SNADQRSNET TNSNSIEMVS
501: GFLYNMLQKE VVSLRKACHE KDQSLKDKDD AIEMLAKKVD TLTKAMEVEA KKMRREVAAM EKEVAAMRVD KDQEIKARRL GNSKGSGSSQ LLPGRSAPRS
601: GLARNFQ
Best Arabidopsis Sequence Match ( AT1G24764.1 )
(BLAST)
001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
Arabidopsis Description
ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.