Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010978.1-P | Field mustard | nucleus | 77.49 | 87.89 |
| AT1G68060.1 | Thale cress | nucleus, plastid | 77.34 | 86.17 |
| CDY36126 | Canola | nucleus | 75.76 | 85.09 |
| CDY24415 | Canola | nucleus | 28.28 | 76.86 |
| KRH49658 | Soybean | cytosol | 67.68 | 76.76 |
| KRH70354 | Soybean | endoplasmic reticulum | 67.24 | 76.14 |
| VIT_01s0011g05790.t01 | Wine grape | cytosol | 69.84 | 75.98 |
| Solyc01g005330.2.1 | Tomato | cytosol | 67.1 | 74.76 |
| Solyc04g008040.2.1 | Tomato | nucleus | 66.52 | 74.72 |
| PGSC0003DMT400051425 | Potato | cytosol, nucleus, plasma membrane | 67.1 | 74.52 |
| KRH41720 | Soybean | cytosol | 66.23 | 74.51 |
| KRH60419 | Soybean | cytosol, plastid | 66.23 | 74.51 |
| AT1G14840.1 | Thale cress | plastid | 64.65 | 74.17 |
| PGSC0003DMT400075913 | Potato | cytosol | 65.95 | 74.07 |
| PGSC0003DMT400056068 | Potato | cytosol | 66.09 | 73.63 |
| Solyc05g017980.2.1 | Tomato | cytosol | 65.8 | 73.31 |
| TraesCS6D01G278500.1 | Wheat | cytosol | 62.91 | 72.79 |
| TraesCS6B01G328200.1 | Wheat | cytosol | 60.17 | 72.52 |
| Os02t0736100-01 | Rice | cytosol | 62.63 | 72.45 |
| AT2G01750.2 | Thale cress | nucleus | 65.8 | 72.38 |
| TraesCS6A01G298800.1 | Wheat | cytosol | 62.05 | 71.79 |
| EES07297 | Sorghum | cytosol | 59.6 | 70.0 |
| TraesCS7A01G200700.1 | Wheat | nucleus | 61.18 | 69.85 |
| TraesCS7D01G204000.1 | Wheat | nucleus | 61.18 | 69.85 |
| TraesCS7B01G107500.1 | Wheat | nucleus | 61.04 | 69.69 |
| EER89530 | Sorghum | nucleus | 60.75 | 69.47 |
| Zm00001d017961_P003 | Maize | cytosol | 58.73 | 68.98 |
| Zm00001d037291_P001 | Maize | nucleus | 60.17 | 68.81 |
| Os06t0251700-01 | Rice | nucleus | 59.88 | 68.26 |
| Zm00001d044724_P001 | Maize | cytosol | 59.6 | 68.15 |
| HORVU7Hr1G041170.1 | Barley | nucleus | 60.89 | 68.06 |
| HORVU0Hr1G017080.1 | Barley | nucleus, plastid | 62.63 | 64.39 |
| AT4G17220.1 | Thale cress | cytosol | 34.2 | 46.2 |
Protein Annotations
| MapMan:35.1 | EntrezGene:839083 | UniProt:A0A1P8ATC8 | ProteinID:ANM59912.1 | ArrayExpress:AT1G24764 | EnsemblPlantsGene:AT1G24764 |
| RefSeq:AT1G24764 | TAIR:AT1G24764 | RefSeq:AT1G24764-TAIR-G | EnsemblPlants:AT1G24764.3 | Symbol:ATMAP70-2 | Unigene:At.41398 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0007010 |
| GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| InterPro:MAP70 | RefSeq:NP_001322232.1 | PFAM:PF07058 | PANTHER:PTHR31246 | PANTHER:PTHR31246:SF2 | TMHMM:TMhelix |
| UniParc:UPI00084949A7 | SEG:seg | : | : | : | : |
Description
ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
Coordinates
chr1:-:8760001..8763469
Molecular Weight (calculated)
77128.4 Da
IEP (calculated)
7.607
GRAVY (calculated)
-0.695
Length
693 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRHHLSLSC QICNCIFIYK SLFSLLILFS LTFSNNLSLW HLDLEVLFVY ISNKGIRSEM SDVSGDGDLS ATVTEHEVTP QPPVSSATYP SLTVSASYKE
101: SSGGKSSSKR RPIRPSFDAA ADNEFITLLH GSDPVKVELN RLENEVRDKD RELGEANAEI KALRLSERQR EKAVEELTEE LTKLDEKLKL TESILESKNL
201: EIKKINEEKK ASMAAQFAAE ATLRRVHAAQ KDDDMPPIEA ILAPLEAELK LARSEIGKLQ EDNRALDRLT KSKEAALLEA ERTVEAAMAK AAMVDDLQNK
301: NQELMKQIEI CQEENKILDR MHRQKVAEVE KLTQTVRELE EAVLAGGAAA NAVRDYQRKF QEMNEERKTL DRELARAKVT ANRVATVVAN EWKDGNDKVM
401: PVKQWLEERR FLQGEMQQLR DKLAITDRAA KSEAQLKEKF QLRLKVLEET LRGTSSSATR NTPEARSMSN GPSRRQSLGG AENLQKFTSN GALSKKAPAS
501: QMRHSLSINS TSVLKNAKGT SKSFDGGTRS VDRGKALLNG PGNYSFNKAT DDSKEAESGN GWKENSEEKP QSEDPEAATE DSVPGVLYDL LQKEVVSLRK
601: ASNEKDQSLK DKDDAIEMLA KKVETLTKAM EVEAKKMRRE VAAMEKEVAA MRVEKDQDAR AKRFSNSKSP SNTAQILAGR AAGRSGGLTK STQ
101: SSGGKSSSKR RPIRPSFDAA ADNEFITLLH GSDPVKVELN RLENEVRDKD RELGEANAEI KALRLSERQR EKAVEELTEE LTKLDEKLKL TESILESKNL
201: EIKKINEEKK ASMAAQFAAE ATLRRVHAAQ KDDDMPPIEA ILAPLEAELK LARSEIGKLQ EDNRALDRLT KSKEAALLEA ERTVEAAMAK AAMVDDLQNK
301: NQELMKQIEI CQEENKILDR MHRQKVAEVE KLTQTVRELE EAVLAGGAAA NAVRDYQRKF QEMNEERKTL DRELARAKVT ANRVATVVAN EWKDGNDKVM
401: PVKQWLEERR FLQGEMQQLR DKLAITDRAA KSEAQLKEKF QLRLKVLEET LRGTSSSATR NTPEARSMSN GPSRRQSLGG AENLQKFTSN GALSKKAPAS
501: QMRHSLSINS TSVLKNAKGT SKSFDGGTRS VDRGKALLNG PGNYSFNKAT DDSKEAESGN GWKENSEEKP QSEDPEAATE DSVPGVLYDL LQKEVVSLRK
601: ASNEKDQSLK DKDDAIEMLA KKVETLTKAM EVEAKKMRRE VAAMEKEVAA MRVEKDQDAR AKRFSNSKSP SNTAQILAGR AAGRSGGLTK STQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.