CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010978.1-P	Field mustard	nucleus	92.71	93.62
CDX84971	Canola	cytosol	85.41	85.69
CDX84402	Canola	cytosol	8.43	85.25
CDY40783	Canola	plastid	84.12	84.67
CDY27573	Canola	nucleus, plastid	85.74	84.5
CDY03865	Canola	nucleus	82.66	82.79
CDX96050	Canola	nucleus, plastid	83.14	82.08
CDY24415	Canola	nucleus	33.87	81.96
CDY04200	Canola	plastid	81.85	81.85
CDY01879	Canola	nucleus	82.17	81.25
CDY07403	Canola	nucleus, plastid	81.36	81.23
AT1G24764.3	Thale cress	endoplasmic reticulum, extracellular	85.09	75.76
KRH49658	Soybean	cytosol	72.93	73.65
KRH70354	Soybean	endoplasmic reticulum	72.61	73.2
KRH60419	Soybean	cytosol, plastid	71.8	71.92
KRH41720	Soybean	cytosol	71.64	71.75
VIT_01s0011g05790.t01	Wine grape	cytosol	74.07	71.74
Solyc04g008040.2.1	Tomato	nucleus	71.15	71.15
CDX95376	Canola	cytosol	7.13	70.97
Solyc01g005330.2.1	Tomato	cytosol	71.31	70.74
PGSC0003DMT400051425	Potato	cytosol, nucleus, plasma membrane	71.31	70.51
PGSC0003DMT400075913	Potato	cytosol	70.5	70.5
TraesCS6D01G278500.1	Wheat	cytosol	68.4	70.45
CDY33736	Canola	nucleus	68.72	70.08
TraesCS6A01G298800.1	Wheat	cytosol	67.91	69.95
CDX81676	Canola	plastid	67.1	69.93
TraesCS6B01G328200.1	Wheat	cytosol	65.15	69.91
CDX95377	Canola	cytosol	7.13	69.84
Os02t0736100-01	Rice	cytosol	67.75	69.78
PGSC0003DMT400056068	Potato	cytosol	70.02	69.45
CDY45293	Canola	nucleus	67.42	69.22
Solyc05g017980.2.1	Tomato	cytosol	69.69	69.13
CDY51769	Canola	nucleus	67.26	68.94
CDY17639	Canola	nucleus, plastid	68.4	67.74
EES07297	Sorghum	cytosol	64.18	67.12
CDY36256	Canola	nucleus, plastid	67.42	66.88
TraesCS7A01G200700.1	Wheat	nucleus	65.64	66.72
TraesCS7B01G107500.1	Wheat	nucleus	65.64	66.72
TraesCS7D01G204000.1	Wheat	nucleus	65.64	66.72
Zm00001d017961_P003	Maize	cytosol	63.37	66.27
EER89530	Sorghum	nucleus	64.83	66.01
Zm00001d037291_P001	Maize	nucleus	64.18	65.35
Os06t0251700-01	Rice	nucleus	64.34	65.3
Zm00001d044724_P001	Maize	cytosol	63.86	65.02
HORVU7Hr1G041170.1	Barley	nucleus	65.32	65.0
HORVU0Hr1G017080.1	Barley	nucleus, plastid	67.91	62.17
CDY35590	Canola	cytosol	39.06	46.89
CDY42967	Canola	cytosol, nucleus, plasma membrane	37.6	46.4
CDX90483	Canola	cytosol	37.76	46.32
CDY09638	Canola	cytosol	37.44	45.92

Protein Annotations

EnsemblPlants:CDY36126	EnsemblPlantsGene:GSBRNA2T00059967001	GO:A0A078HEB9	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007010	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP70
ncoils:Coil	PANTHER:PTHR31246	PANTHER:PTHR31246:SF2	PFAM:PF07058	ProteinID:CDY36126	ProteinID:CDY36126.1
SEG:seg	UniParc:UPI0004EF1B18	UniProt:A0A078HEB9	MapMan:35.1	:	:

Description

BnaA08g19220DBnaA08g19220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HEB9]

Coordinates

chrLK032367:+:253304..256594

Molecular Weight (calculated)

68758.2 Da

IEP (calculated)

9.001

GRAVY (calculated)

-0.832

Length

617 amino acids

Sequence
(BLAST)

001: MSDVSGDGDA TASITQPASS YPSLKVSASY KESGGGKSFS KRRPIKLSLD DAAAENEFIT QLHGSDPVKV ELNRLENEVR DKDRELGEAH AEIKALRLSE
101: RQREKAVEEH TEELAKLDEK LKLTESILQS KNLEIKKINE EKKASMAAQF AAEATLRRVH AAQKDDDIPP IEAILAPLEA ELKLARSEIG KLQEDNRALD
201: RLTKSKEAAL LDAERTIEGA LAKAALVDDL QNKNQELMKQ IEICQEENKI LDKMHRQKVA DVEKLTQTVK ELEEAVLAGG TAANSVRDYQ RKFQEMNEER
301: KTLDRELARA KVTANRVATV VANEWKDGND KVMPVKQWLE ERRFLQGEMQ QLRDKLAITN RAAKSEAQLK EKFQLRLKVL EETLKGTSSS SIRNTSERRT
401: MSSGPSRRQS LGGSENLQRF PSNGALSKKA PASQMRHSLS INSTSMLKNS KGTSTSFDGG TRSLDRGKAL LNGPGNYSFN KASDESKEPE PATGWKDSSE
501: EKTQSENTPA ASEDSVPGVL YDLLQKEVVS LRKASHEKDQ SLKDKDDAIE MLAKKVETLT KAMEVEAKKM RREVAAMEKE VAAMRVEKDQ DNRAKRFSNI
601: KSSSNTAQIL AGRYIYS

Best Arabidopsis Sequence Match ( AT1G24764.1 )
(BLAST)

001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ

Arabidopsis Description

ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.