CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012493.1-P	Field mustard	nucleus	96.9	96.9
CDY03865	Canola	nucleus	93.96	93.51
CDX84971	Canola	cytosol	91.03	90.73
CDY27573	Canola	nucleus, plastid	91.03	89.14
CDX84402	Canola	cytosol	8.48	85.25
CDY36126	Canola	nucleus	84.67	84.12
CDY07403	Canola	nucleus, plastid	84.18	83.5
CDX96050	Canola	nucleus, plastid	83.52	81.92
CDY04200	Canola	plastid	82.22	81.69
CDY01879	Canola	nucleus	82.06	80.61
KRH49658	Soybean	cytosol	75.04	75.29
KRH70354	Soybean	endoplasmic reticulum	74.55	74.67
CDX95377	Canola	cytosol	7.67	74.6
Solyc04g008040.2.1	Tomato	nucleus	74.71	74.23
KRH60419	Soybean	cytosol, plastid	74.23	73.86
PGSC0003DMT400075913	Potato	cytosol	74.23	73.74
VIT_01s0011g05790.t01	Wine grape	cytosol	76.35	73.47
KRH41720	Soybean	cytosol	73.57	73.21
CDY24415	Canola	nucleus	30.34	72.94
Solyc01g005330.2.1	Tomato	cytosol	73.9	72.83
CDX95376	Canola	cytosol	7.34	72.58
PGSC0003DMT400051425	Potato	cytosol, nucleus, plasma membrane	73.74	72.44
CDX81676	Canola	plastid	69.33	71.79
CDY33736	Canola	nucleus	70.64	71.57
PGSC0003DMT400056068	Potato	cytosol	72.43	71.38
CDY45293	Canola	nucleus	69.98	71.38
TraesCS6D01G278500.1	Wheat	cytosol	69.49	71.12
CDY51769	Canola	nucleus	69.82	71.1
Solyc05g017980.2.1	Tomato	cytosol	72.1	71.06
Os02t0736100-01	Rice	cytosol	69.0	70.62
TraesCS6B01G328200.1	Wheat	cytosol	65.91	70.26
TraesCS6A01G298800.1	Wheat	cytosol	68.35	69.95
CDY17639	Canola	nucleus, plastid	70.64	69.5
TraesCS7D01G204000.1	Wheat	nucleus	68.03	68.7
CDY36256	Canola	nucleus, plastid	69.66	68.65
TraesCS7A01G200700.1	Wheat	nucleus	67.86	68.53
TraesCS7B01G107500.1	Wheat	nucleus	67.86	68.53
EES07297	Sorghum	cytosol	65.91	68.47
EER89530	Sorghum	nucleus	67.21	67.99
Os06t0251700-01	Rice	nucleus	67.21	67.76
Zm00001d037291_P001	Maize	nucleus	66.72	67.49
Zm00001d017961_P003	Maize	cytosol	64.6	67.12
HORVU7Hr1G041170.1	Barley	nucleus	67.7	66.94
Zm00001d044724_P001	Maize	cytosol	65.74	66.5
HORVU0Hr1G017080.1	Barley	nucleus, plastid	69.49	63.2
CDY35590	Canola	cytosol	38.5	45.91
CDX90483	Canola	cytosol	37.52	45.73
CDY09638	Canola	cytosol	37.19	45.33
CDY42967	Canola	cytosol, nucleus, plasma membrane	36.87	45.2

Protein Annotations

EnsemblPlants:CDY40783	EnsemblPlantsGene:GSBRNA2T00071688001	GO:A0A078HVH5	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007010	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP70
ncoils:Coil	PANTHER:PTHR31246	PANTHER:PTHR31246:SF2	PFAM:PF07058	ProteinID:CDY40783	ProteinID:CDY40783.1
SEG:seg	UniParc:UPI0004EDB016	UniProt:A0A078HVH5	MapMan:35.1	:	:

Description

BnaAnng06460DBnaAnng06460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HVH5]

Coordinates

chrLK032478:+:247933..250914

Molecular Weight (calculated)

68109.5 Da

IEP (calculated)

9.407

GRAVY (calculated)

-0.819

Length

613 amino acids

Sequence
(BLAST)

001: MSDVSGDGDA TATYPSLTVS ASYKESGGGK SSSKRRPIRP SFEAAADNEL ITMLHGSDPV KVELNRLENE VRDKDRELGE AHAEIRALRL SERQREKAVE
101: ELTEELAKLD EKLKLTESIL QSKNLEIKKI NEEKKASMAA QFAAEATLRR VHAAQKDDDM PPIEAILAPL EAELKLARSE IGKLQEDNRA LDRLTKSKEA
201: ALLDADRTVE GALAKAAMVD DLQNKNQELM KQIEICQEEN KILDKMHRQK VAEVEKLTQT VRELEEAVLA GGATANTVRD YQRKVQEINE ERKTLDRELA
301: RAKVTANRVA TVVANEWKDG NDKVMPVKQW LEERRFLQGE MQQLRDKLAI TDRAAKSEAL LKEKFQQRLK VLEETLKGTS SSSSTTTRNL SETRSMSNGP
401: SRRQSLGGSD NLQRLPSNGS FSKKAPSFQM RHSLSINSTS VLKNAKGTSK SFDGGTRSLD RGKALLNGPG NYSFNKASSD DSKDTEEKAQ REDHAAAAAT
501: EDSVPGVLYD LLQKEVVSLR KASHEKDQSL KDKDDAIEML ARKVETLTKA MEVEAKKMRR ELAAMEKEVA AMRVEKDQDN RAKRFSNSKS SSNTAQILAA
601: RAAGRSSLTK STQ

Best Arabidopsis Sequence Match ( AT1G24764.1 )
(BLAST)

001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ

Arabidopsis Description

ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.