Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400063083 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G68060.1 | PGSC0003DMT400063083 | AT5G61010.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g008040.2.1 | Tomato | nucleus | 98.06 | 98.06 |
| PGSC0003DMT400051425 | Potato | cytosol, nucleus, plasma membrane | 83.31 | 82.37 |
| PGSC0003DMT400056068 | Potato | cytosol | 81.52 | 80.87 |
| KRH70354 | Soybean | endoplasmic reticulum | 79.74 | 80.39 |
| KRH49658 | Soybean | cytosol | 79.58 | 80.36 |
| KRH60419 | Soybean | cytosol, plastid | 79.9 | 80.03 |
| KRH41720 | Soybean | cytosol | 79.42 | 79.55 |
| VIT_01s0011g05790.t01 | Wine grape | cytosol | 80.06 | 77.55 |
| PGSC0003DMT400038689 | Potato | cytosol | 39.55 | 75.78 |
| CDX84971 | Canola | cytosol | 74.72 | 74.96 |
| CDY07403 | Canola | nucleus, plastid | 74.72 | 74.6 |
| CDY40783 | Canola | plastid | 73.74 | 74.23 |
| CDY27573 | Canola | nucleus, plastid | 75.2 | 74.12 |
| Bra004279.1-P | Field mustard | nucleus, plastid | 75.04 | 74.08 |
| CDX96050 | Canola | nucleus, plastid | 75.04 | 74.08 |
| AT1G68060.1 | Thale cress | nucleus, plastid | 74.55 | 73.95 |
| Bra004053.1-P | Field mustard | nucleus, plastid | 74.07 | 73.95 |
| CDY04200 | Canola | plastid | 73.91 | 73.91 |
| TraesCS6D01G278500.1 | Wheat | cytosol | 71.64 | 73.79 |
| Bra012493.1-P | Field mustard | nucleus | 73.1 | 73.57 |
| CDY01879 | Canola | nucleus | 74.07 | 73.24 |
| CDY03865 | Canola | nucleus | 73.1 | 73.21 |
| TraesCS6B01G328200.1 | Wheat | cytosol | 68.07 | 73.04 |
| AT1G14840.1 | Thale cress | plastid | 71.47 | 73.01 |
| Os02t0736100-01 | Rice | cytosol | 70.66 | 72.79 |
| TraesCS6A01G298800.1 | Wheat | cytosol | 70.66 | 72.79 |
| Bra032784.1-P | Field mustard | nucleus | 70.18 | 72.65 |
| Bra010978.1-P | Field mustard | nucleus | 71.47 | 72.18 |
| CDX81676 | Canola | plastid | 68.88 | 71.79 |
| CDY33736 | Canola | nucleus | 70.18 | 71.57 |
| Bra025859.1-P | Field mustard | nucleus | 52.51 | 71.52 |
| CDY45293 | Canola | nucleus | 69.37 | 71.21 |
| Bra026800.1-P | Field mustard | nucleus | 69.37 | 71.21 |
| Bra026184.1-P | Field mustard | nucleus | 68.72 | 71.14 |
| CDY51769 | Canola | nucleus | 69.37 | 71.1 |
| EER89530 | Sorghum | nucleus | 69.37 | 70.63 |
| CDY36126 | Canola | nucleus | 70.5 | 70.5 |
| TraesCS7B01G107500.1 | Wheat | nucleus | 69.21 | 70.35 |
| EES07297 | Sorghum | cytosol | 67.26 | 70.34 |
| CDY17639 | Canola | nucleus, plastid | 70.99 | 70.31 |
| Zm00001d044724_P001 | Maize | cytosol | 69.04 | 70.3 |
| TraesCS7D01G204000.1 | Wheat | nucleus | 69.04 | 70.18 |
| AT2G01750.2 | Thale cress | nucleus | 71.47 | 70.0 |
| Os06t0251700-01 | Rice | nucleus | 68.88 | 69.9 |
| TraesCS7A01G200700.1 | Wheat | nucleus | 68.72 | 69.85 |
| Bra024854.1-P | Field mustard | nucleus, plastid | 71.15 | 69.68 |
| Zm00001d017961_P003 | Maize | cytosol | 66.45 | 69.49 |
| Zm00001d037291_P001 | Maize | nucleus | 68.23 | 69.47 |
| CDY36256 | Canola | nucleus, plastid | 69.85 | 69.29 |
| HORVU7Hr1G041170.1 | Barley | nucleus | 68.56 | 68.23 |
| AT1G24764.3 | Thale cress | endoplasmic reticulum, extracellular | 74.07 | 65.95 |
| HORVU0Hr1G017080.1 | Barley | nucleus, plastid | 70.34 | 64.39 |
| PGSC0003DMT400034592 | Potato | cytosol | 27.23 | 63.88 |
| CDY24415 | Canola | nucleus | 23.01 | 55.69 |
| PGSC0003DMT400038827 | Potato | cytosol | 41.17 | 50.3 |
| PGSC0003DMT400038687 | Potato | cytosol | 23.01 | 44.24 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400075913 | EnsemblPlantsGene:PGSC0003DMG400029515 | EntrezGene:102578562 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0007010 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:MAP70 |
| ncoils:Coil | PANTHER:PTHR31246 | PANTHER:PTHR31246:SF2 | PFAM:PF07058 | PGSC:PGSC0003DMG400029515 | RefSeq:XP_006355060.1 |
| SEG:seg | UniParc:UPI000296B5E3 | UniProt:M1CVX5 | MapMan:35.1 | : | : |
Description
Myosin heavy chain, clone [Source:PGSC_GENE;Acc:PGSC0003DMG400029515]
Coordinates
chr4:+:2701611..2707308
Molecular Weight (calculated)
69257.0 Da
IEP (calculated)
9.540
GRAVY (calculated)
-0.867
Length
617 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEVSCDNSY NVRQPTSDTA GFTTPLTVAA SFKEGKTYRR RTSMRPSLDA DEFLNLLHGS DPVKVELNRL ENELRDKDRE LSEAQAEIKS LRLSERLREK
101: AVEELTDEWS RVDEKLKLTE SLLESKNLEI KKINEEKKAS MTAQFAAEAT LRRVHAAQKD DDMPPIEAIL APLEAELKLA RQEIAKLQDD NKALDRLTKS
201: KEAALLDAER TVQSALAKAS MVDDLQNKNQ DLMKQIEICQ EENKILDRMH RQKVAEVEKL TQTVRELEEA VLAGGAAANA VRDYQRKVQE MNEERKTLDR
301: ELARAKVTAN RVATVVANEW KDASDKVMPV KQWLEERKFL QGELQQLRDK LAISERTAKS EAQLKEKYHL RLKVLEETLK STSTGARTTP DGRSSSNGPS
401: RRRSLGGADN ISKLTSNGIL PKRSPSFQLR SSGASTVLKH AKGTSKSFDG GSRSLDRSKK LLNGTGPNFN SSKSCDGTKD NETESNLWKA NQDEKLNDSQ
501: MTRTEDTVPG VLYDLLQKEV IALRKAGHEK DQSLNDKDDA IEMLAKKVET LTKAMEVEAK KMRREVAAME KEVSAMRVEK EQENRAKRFA NSKGPVNSSQ
601: PLPGRNVARN GLTRGTQ
101: AVEELTDEWS RVDEKLKLTE SLLESKNLEI KKINEEKKAS MTAQFAAEAT LRRVHAAQKD DDMPPIEAIL APLEAELKLA RQEIAKLQDD NKALDRLTKS
201: KEAALLDAER TVQSALAKAS MVDDLQNKNQ DLMKQIEICQ EENKILDRMH RQKVAEVEKL TQTVRELEEA VLAGGAAANA VRDYQRKVQE MNEERKTLDR
301: ELARAKVTAN RVATVVANEW KDASDKVMPV KQWLEERKFL QGELQQLRDK LAISERTAKS EAQLKEKYHL RLKVLEETLK STSTGARTTP DGRSSSNGPS
401: RRRSLGGADN ISKLTSNGIL PKRSPSFQLR SSGASTVLKH AKGTSKSFDG GSRSLDRSKK LLNGTGPNFN SSKSCDGTKD NETESNLWKA NQDEKLNDSQ
501: MTRTEDTVPG VLYDLLQKEV IALRKAGHEK DQSLNDKDDA IEMLAKKVET LTKAMEVEAK KMRREVAAME KEVSAMRVEK EQENRAKRFA NSKGPVNSSQ
601: PLPGRNVARN GLTRGTQ
001: MSDVSADGGF LSAEQATTPV AIPTPYPSLT VSASYKEKSS GRRRPVRPSF DAAADNEFIT LLHGSDPVKV ELNRLENEVR DKDRELSEAN AEIKALRLSE
101: RQREKACEEL TDELAKLDGK LKLTESLLQS KNLEIKKINE EKKASMAAQF AAEATLRRVH AAQKDDDMPP IEAILAPLEA ELKLARSEIG KLQEDNRALD
201: RLTKSKEAAL LDAERTVETA LAKAALVDDL QNKNQELMKQ IEICQEENKI LDRMHRQKVA EVEKLTQTVR ELEEAVLAGG AAANAVRDYQ RKFQEMNEER
301: KTLDRELARA KVTANRVATV VANEWKDGND KVMPVKQWLE ERRFLQGEMQ QLRDKLAISD RAAKSEAQLK DKFQLRLRVL EETLRGTSSI SIRNTPEGRS
401: MSNGPSRRQS IGGSDNLQKF ASNGFLSKKT PMRNSFTSNS TSVLKNAKGT SKSFDGGTRS LDRGKALLKG PGNYSFNKAC DETKESESPN TWKEDSEEKP
501: PSELPAPATE DNVPGVLYDL LQKEVVALRK SSHEKDQSLK DKDDAIEMLA KKVETLTKAM EVEAKKMRRE VAAMEKEVAA MRVDKDQDNR AKRSSNTKPS
601: SNTAQILAAR AAGRSGLTRS TQ
101: RQREKACEEL TDELAKLDGK LKLTESLLQS KNLEIKKINE EKKASMAAQF AAEATLRRVH AAQKDDDMPP IEAILAPLEA ELKLARSEIG KLQEDNRALD
201: RLTKSKEAAL LDAERTVETA LAKAALVDDL QNKNQELMKQ IEICQEENKI LDRMHRQKVA EVEKLTQTVR ELEEAVLAGG AAANAVRDYQ RKFQEMNEER
301: KTLDRELARA KVTANRVATV VANEWKDGND KVMPVKQWLE ERRFLQGEMQ QLRDKLAISD RAAKSEAQLK DKFQLRLRVL EETLRGTSSI SIRNTPEGRS
401: MSNGPSRRQS IGGSDNLQKF ASNGFLSKKT PMRNSFTSNS TSVLKNAKGT SKSFDGGTRS LDRGKALLKG PGNYSFNKAC DETKESESPN TWKEDSEEKP
501: PSELPAPATE DNVPGVLYDL LQKEVVALRK SSHEKDQSLK DKDDAIEMLA KKVETLTKAM EVEAKKMRRE VAAMEKEVAA MRVDKDQDNR AKRSSNTKPS
601: SNTAQILAAR AAGRSGLTRS TQ
Arabidopsis Description
MAP70.1Microtubule-associated protein 70-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X0]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.