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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 3
  • plastid 2
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra004053.1-P Field mustard nucleus, plastid 89.07 89.64
CDY07403 Canola nucleus, plastid 89.07 89.64
CDY04200 Canola plastid 88.75 89.47
Bra004279.1-P Field mustard nucleus, plastid 89.39 88.96
CDX96050 Canola nucleus, plastid 89.39 88.96
CDY01879 Canola nucleus 88.26 87.98
KRH49658 Soybean cytosol 76.21 77.58
AT1G24764.3 Thale cress endoplasmic reticulum, extracellular 86.17 77.34
KRH70354 Soybean endoplasmic reticulum 75.56 76.8
KRH60419 Soybean cytosol, plastid 75.4 76.14
KRH41720 Soybean cytosol 75.24 75.97
Solyc01g005330.2.1 Tomato cytosol 74.92 74.92
PGSC0003DMT400051425 Potato cytosol, nucleus, plasma membrane 74.92 74.68
PGSC0003DMT400075913 Potato cytosol 73.95 74.55
Solyc04g008040.2.1 Tomato nucleus 73.79 74.39
VIT_01s0011g05790.t01 Wine grape cytosol 76.05 74.25
PGSC0003DMT400056068 Potato cytosol 73.95 73.95
Solyc05g017980.2.1 Tomato cytosol 73.47 73.47
AT1G14840.1 Thale cress plastid 71.22 73.34
AT2G01750.2 Thale cress nucleus 72.83 71.9
Os02t0736100-01 Rice cytosol 69.13 71.79
TraesCS6D01G278500.1 Wheat cytosol 68.81 71.45
TraesCS6A01G298800.1 Wheat cytosol 68.33 70.95
TraesCS6B01G328200.1 Wheat cytosol 65.43 70.78
TraesCS7D01G204000.1 Wheat nucleus 67.85 69.52
TraesCS7A01G200700.1 Wheat nucleus 67.52 69.19
TraesCS7B01G107500.1 Wheat nucleus 67.52 69.19
EES07297 Sorghum cytosol 65.27 68.81
EER89530 Sorghum nucleus 66.88 68.65
Zm00001d037291_P001 Maize nucleus 66.56 68.32
Os06t0251700-01 Rice nucleus 66.56 68.09
Zm00001d044724_P001 Maize cytosol 66.08 67.82
Zm00001d017961_P003 Maize cytosol 64.15 67.63
HORVU7Hr1G041170.1 Barley nucleus 67.04 67.26
HORVU0Hr1G017080.1 Barley nucleus, plastid 68.01 62.76
AT4G17220.1 Thale cress cytosol 37.78 45.81
Protein Annotations
MapMan:35.1EntrezGene:843134ProteinID:AAG52019.1ProteinID:AEE34742.1EMBL:AM086438ArrayExpress:AT1G68060
EnsemblPlantsGene:AT1G68060RefSeq:AT1G68060TAIR:AT1G68060RefSeq:AT1G68060-TAIR-GEnsemblPlants:AT1G68060.1TAIR:AT1G68060.1
Symbol:ATMAP70-1EMBL:AY074303EMBL:AY096658Unigene:At.28095ncoils:CoilGO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005819GO:GO:0005856GO:GO:0005874GO:GO:0007010GO:GO:0007275GO:GO:0008017
GO:GO:0008150GO:GO:0009524GO:GO:0009832GO:GO:0009987GO:GO:0010005GO:GO:0010051
GO:GO:0016043GO:GO:0071555InterPro:MAP70RefSeq:NP_176973.1PFAM:PF07058PO:PO:0000003
PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PANTHER:PTHR31246PANTHER:PTHR31246:SF2
UniProt:Q9C9X0UniParc:UPI00000A01BESEG:seg:::
Description
MAP70.1Microtubule-associated protein 70-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X0]
Coordinates
chr1:-:25510887..25514601
Molecular Weight (calculated)
69294.0 Da
IEP (calculated)
9.135
GRAVY (calculated)
-0.807
Length
622 amino acids
Sequence
(BLAST)
001: MSDVSADGGF LSAEQATTPV AIPTPYPSLT VSASYKEKSS GRRRPVRPSF DAAADNEFIT LLHGSDPVKV ELNRLENEVR DKDRELSEAN AEIKALRLSE
101: RQREKACEEL TDELAKLDGK LKLTESLLQS KNLEIKKINE EKKASMAAQF AAEATLRRVH AAQKDDDMPP IEAILAPLEA ELKLARSEIG KLQEDNRALD
201: RLTKSKEAAL LDAERTVETA LAKAALVDDL QNKNQELMKQ IEICQEENKI LDRMHRQKVA EVEKLTQTVR ELEEAVLAGG AAANAVRDYQ RKFQEMNEER
301: KTLDRELARA KVTANRVATV VANEWKDGND KVMPVKQWLE ERRFLQGEMQ QLRDKLAISD RAAKSEAQLK DKFQLRLRVL EETLRGTSSI SIRNTPEGRS
401: MSNGPSRRQS IGGSDNLQKF ASNGFLSKKT PMRNSFTSNS TSVLKNAKGT SKSFDGGTRS LDRGKALLKG PGNYSFNKAC DETKESESPN TWKEDSEEKP
501: PSELPAPATE DNVPGVLYDL LQKEVVALRK SSHEKDQSLK DKDDAIEMLA KKVETLTKAM EVEAKKMRRE VAAMEKEVAA MRVDKDQDNR AKRSSNTKPS
601: SNTAQILAAR AAGRSGLTRS TQ
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.