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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G207800.1
TraesCS1A01G207900.1
TraesCS1B01G221500.1
TraesCS1B01G221900.1
TraesCS1D01G211100.1
TraesCS1D01G211200.1
TraesCS3A01G302600.1
TraesCS3B01G333800.1
TraesCS3D01G299200.1
TraesCS6D01G319000.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G68060.1 TraesCS1A01G207800.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1A01G207900.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1B01G221500.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1B01G221900.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1D01G211100.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS1D01G211200.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS6D01G319000.1 AT2G45920.1 21798944
AT1G68060.1 TraesCS3A01G302600.1 AT5G61010.1 21798944
AT1G68060.1 TraesCS3B01G333800.1 AT5G61010.1 21798944
AT1G68060.1 TraesCS3D01G299200.1 AT5G61010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G298800.1 Wheat cytosol 97.57 93.66
TraesCS6D01G278500.1 Wheat cytosol 96.7 92.82
Os02t0736100-01 Rice cytosol 88.0 84.47
EES07297 Sorghum cytosol 84.35 82.2
Zm00001d017961_P003 Maize cytosol 84.17 82.03
HORVU0Hr1G017080.1 Barley nucleus, plastid 94.43 80.56
TraesCS7B01G107500.1 Wheat nucleus 82.43 78.09
KRH49658 Soybean cytosol 74.43 70.05
KRH70354 Soybean endoplasmic reticulum 73.91 69.44
VIT_01s0011g05790.t01 Wine grape cytosol 76.87 69.39
TraesCS5B01G000600.2 Wheat cytosol 70.09 69.36
KRH60419 Soybean cytosol, plastid 73.74 68.83
KRH41720 Soybean cytosol 73.04 68.18
PGSC0003DMT400075913 Potato cytosol 73.04 68.07
Solyc04g008040.2.1 Tomato nucleus 73.04 68.07
PGSC0003DMT400056068 Potato cytosol 72.87 67.36
Solyc05g017980.2.1 Tomato cytosol 72.7 67.2
Solyc01g005330.2.1 Tomato cytosol 72.52 67.04
CDX84971 Canola cytosol 71.3 66.67
PGSC0003DMT400051425 Potato cytosol, nucleus, plasma membrane 72.17 66.51
Bra010978.1-P Field mustard nucleus 70.61 66.45
Bra025859.1-P Field mustard nucleus 52.17 66.23
CDY27573 Canola nucleus, plastid 72.0 66.13
CDY40783 Canola plastid 70.26 65.91
CDY04200 Canola plastid 70.61 65.8
CDX96050 Canola nucleus, plastid 71.48 65.76
Bra004279.1-P Field mustard nucleus, plastid 71.48 65.76
CDY07403 Canola nucleus, plastid 70.61 65.7
Bra004053.1-P Field mustard nucleus, plastid 70.61 65.7
Bra012493.1-P Field mustard nucleus 69.91 65.58
AT1G68060.1 Thale cress nucleus, plastid 70.78 65.43
CDY01879 Canola nucleus 70.96 65.38
CDY03865 Canola nucleus 69.91 65.26
CDY36126 Canola nucleus 69.91 65.15
AT1G14840.1 Thale cress plastid 68.0 64.74
Bra032784.1-P Field mustard nucleus 66.78 64.43
CDX81676 Canola plastid 66.09 64.19
Bra026800.1-P Field mustard nucleus 66.78 63.89
CDY17639 Canola nucleus, plastid 68.7 63.4
Bra024854.1-P Field mustard nucleus, plastid 69.39 63.33
Bra026184.1-P Field mustard nucleus 65.57 63.26
CDY45293 Canola nucleus 66.09 63.23
CDY33736 Canola nucleus 66.43 63.14
CDY51769 Canola nucleus 66.09 63.12
CDY36256 Canola nucleus, plastid 68.17 63.02
AT2G01750.2 Thale cress nucleus 68.7 62.7
AT1G24764.3 Thale cress endoplasmic reticulum, extracellular 72.52 60.17
CDY24415 Canola nucleus 24.35 54.9
TraesCS4B01G245400.1 Wheat nucleus 33.39 36.16
Protein Annotations
EnsemblPlants:TraesCS6B01G328200.1EnsemblPlantsGene:TraesCS6B01G328200GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0007010
GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016043InterPro:MAP70ncoils:Coil
PANTHER:PTHR31246PANTHER:PTHR31246:SF4PFAM:PF07058SEG:segMapMan:35.1:
Description
No Description!
Coordinates
chr6B:+:578093648..578100311
Molecular Weight (calculated)
63663.6 Da
IEP (calculated)
9.231
GRAVY (calculated)
-0.786
Length
575 amino acids
Sequence
(BLAST)
001: MADGGGEEGN ASAHRGSSRR RGAAQVGLDA DELLTLMHGS DPVKVELNRL ENEVRDKDRE LGEAQAEIKA LRLSERAREK AVEENLELKK TNDEKKAAMA
101: AQFAAEATLR RVHAAQKDDD MPPIEAILAP LEAELKLARQ EIAKLQEDNR ALDRLTKQKE AALLEAERTV QTALAKAAMV DDMQNKNQDL MKQIEICQEE
201: NKILDRLHRQ KVAEVEKLSQ TVRELEEAVL AGGAAANAVR DYQRKVQEMN EERKVLDREL ARTKVTANRV AVVVANEWKD GNDKVMPVKQ WLEERRFLQG
301: EMQQLRDKLA IAERTARSEA QVKEKYQWRL KVLEDGLRGP PSGSSRPPTE GRNTSSGSSR RLSLGGADNL SKVSPVGALM RRSPSFNSRP SLSTGSSLVL
401: KHAKGTSRSF DGGTRSLDRG KVLVNGPHLL NRSTDAVGDC ETTDSWKASG EEKNTETTNN DSTDMVSGVL YDMLQKEVVS LRKACHEKDQ SLKDKDDAIE
501: MLAKKVDTLT KAMEVEAKKM RREVAAMEKE VSAMRLEKEQ ESKAKRLGSL RGPGTVSQAL PGRSAPRGGL ARNVQ
Best Arabidopsis Sequence Match ( AT1G14840.1 )
(BLAST)
001: MEERGFMSPS LAISASYREG GSKGMSRRRS MRPSFDADNE FMNLLHGSDP VRIELNRLEN EVRDKDRELS EGQAEIKALR LSERQREKAV EELTEELGKM
101: AEKLKLIENL LESKNLEIKK INEEKKASMA AQFAAEASLR RVHAAQKDDD MPPIEAILAP LEAELKLSRQ EIAKLQDDNK SLDRLTKSKE AALLDAERTV
201: QSALAKASMV DDLQNKNQEL MKQIEICQEE NRIIDKMHRQ KVAEVEKLMQ SVRELEEAVL AGGAAANAVR DYQRKFQEMN EERKILEREL ARAKVNANRV
301: ATVVANEWKD SNDKVMPVRQ WLEERRFLQG EMQQLRDKLA IADRAAKSEA QLKEKFLLRL RVLEESLKGP TSSSSRGTSV GRSSSNGPTR RQSLGGAETS
401: PKITSNGSLI KRTPSSQLRS LTASASTVLK HAKGTSRSFD GGTRSLDRSK VLINGPRSNF PLNHKSSEGT SRGESPSSIK GEEESADKAT NNDSVPGVLY
501: DLLQKEVITL RKAAHEKDQS LRDKDEAIEM LAKKVETLTK AMDVEAKKMR REVAVMGKEV AAMRVVDKGQ QDSKTRRLSV SKGNTAQLLS GRVSGRIGMT
601: RSTQ
Arabidopsis Description
MAP70.4Microtubule-associated protein 70-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQU7]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.