Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G68060.1 | OQU92181 | AT2G45920.1 | 21798944 |
| AT1G68060.1 | KXG33434 | AT5G61010.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017961_P003 | Maize | cytosol | 96.27 | 96.27 |
| Os02t0736100-01 | Rice | cytosol | 85.76 | 84.47 |
| TraesCS6B01G328200.1 | Wheat | cytosol | 82.2 | 84.35 |
| TraesCS6A01G298800.1 | Wheat | cytosol | 84.58 | 83.31 |
| TraesCS6D01G278500.1 | Wheat | cytosol | 83.22 | 81.97 |
| EER89530 | Sorghum | nucleus | 80.17 | 78.05 |
| HORVU0Hr1G017080.1 | Barley | nucleus, plastid | 81.53 | 71.36 |
| KRH49658 | Soybean | cytosol | 73.73 | 71.19 |
| KRH70354 | Soybean | endoplasmic reticulum | 73.73 | 71.08 |
| KXG24157 | Sorghum | nucleus | 68.31 | 69.97 |
| KRH60419 | Soybean | cytosol, plastid | 72.03 | 68.99 |
| KRH41720 | Soybean | cytosol | 71.86 | 68.83 |
| VIT_01s0011g05790.t01 | Wine grape | cytosol | 74.24 | 68.76 |
| PGSC0003DMT400056068 | Potato | cytosol | 71.19 | 67.52 |
| Solyc05g017980.2.1 | Tomato | cytosol | 71.02 | 67.36 |
| PGSC0003DMT400075913 | Potato | cytosol | 70.34 | 67.26 |
| Solyc01g005330.2.1 | Tomato | cytosol | 70.85 | 67.2 |
| Solyc04g008040.2.1 | Tomato | nucleus | 70.17 | 67.1 |
| PGSC0003DMT400051425 | Potato | cytosol, nucleus, plasma membrane | 70.51 | 66.67 |
| CDX84971 | Canola | cytosol | 68.98 | 66.18 |
| CDY40783 | Canola | plastid | 68.47 | 65.91 |
| CDY27573 | Canola | nucleus, plastid | 69.66 | 65.66 |
| Bra012493.1-P | Field mustard | nucleus | 68.14 | 65.58 |
| CDY04200 | Canola | plastid | 68.47 | 65.48 |
| AT1G68060.1 | Thale cress | nucleus, plastid | 68.81 | 65.27 |
| CDX96050 | Canola | nucleus, plastid | 68.98 | 65.12 |
| Bra004279.1-P | Field mustard | nucleus, plastid | 68.98 | 65.12 |
| AT1G14840.1 | Thale cress | plastid | 66.61 | 65.07 |
| CDY07403 | Canola | nucleus, plastid | 68.14 | 65.05 |
| Bra004053.1-P | Field mustard | nucleus, plastid | 68.14 | 65.05 |
| Bra010978.1-P | Field mustard | nucleus | 67.29 | 64.98 |
| CDY03865 | Canola | nucleus | 67.8 | 64.94 |
| CDX81676 | Canola | plastid | 65.08 | 64.86 |
| CDY01879 | Canola | nucleus | 68.47 | 64.74 |
| Bra026800.1-P | Field mustard | nucleus | 65.59 | 64.39 |
| CDY36126 | Canola | nucleus | 67.12 | 64.18 |
| Bra032784.1-P | Field mustard | nucleus | 64.75 | 64.09 |
| Bra025859.1-P | Field mustard | nucleus | 48.81 | 63.58 |
| CDY33736 | Canola | nucleus | 64.92 | 63.31 |
| Bra026184.1-P | Field mustard | nucleus | 63.73 | 63.09 |
| CDY45293 | Canola | nucleus | 64.24 | 63.06 |
| Bra024854.1-P | Field mustard | nucleus, plastid | 67.29 | 63.02 |
| AT2G01750.2 | Thale cress | nucleus | 67.29 | 63.02 |
| CDY51769 | Canola | nucleus | 64.24 | 62.96 |
| CDY36256 | Canola | nucleus, plastid | 66.27 | 62.86 |
| CDY17639 | Canola | nucleus, plastid | 65.93 | 62.44 |
| AT1G24764.3 | Thale cress | endoplasmic reticulum, extracellular | 70.0 | 59.6 |
| CDY24415 | Canola | nucleus | 21.36 | 49.41 |
| EER95273 | Sorghum | cytosol | 34.92 | 40.31 |
Protein Annotations
| EnsemblPlants:EES07297 | EnsemblPlantsGene:SORBI_3004G246500 | EntrezGene:8068613 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0007010 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:MAP70 |
| ncoils:Coil | PANTHER:PTHR31246 | PANTHER:PTHR31246:SF4 | PFAM:PF07058 | ProteinID:EES07297 | ProteinID:EES07297.1 |
| RefSeq:XP_002454321.1 | SEG:seg | UniParc:UPI0001A85A2F | UniProt:C5XZ95 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr4:-:59421985..59428039
Molecular Weight (calculated)
65546.2 Da
IEP (calculated)
8.886
GRAVY (calculated)
-0.761
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGGGEEGN ASAHKGSARR RGPVPAGLDA DDLLTLMHGS DPVKVELNRL ENEVRDKDRE LGEAHAEIKA LRLSERAREK AVEELTAELE KVDEKLKLTE
101: SLLESKNLEL KKTNDEKKAA LAAQFAAEAT LRRVHAAQKD DDMPPIEAIL APLEAELKLS RKEIAKLQDD NRALDRLTKQ KEAALLEAER TVQIAMAKAA
201: MVDDMQNKNQ ELMKQIEICQ EENKILDRLH RQKVAEVEKL SQTVRELEED VLQGGATANV VRDYQRKVQE MNEEKKIRDR ELARAKVTAN RVAVVVANEW
301: KDANDKVMPV KQWLEERRFL QGEMQQLRDK LAIAERTARS EAQLKEKLQL RLKVLEEGLR GPPSGSSRPP MEGKSLSNGP PRRLSLGGVD SISKISPNGV
401: LMRRSPSFNS RSSLSTSSCL VLKHAKGTSK SFDGGTRSLD RGKVLGSGPH SLNRSTDAVK DCETADNWKA NAEEKSNEIT NNDSADMVSG VLYDVLQKEV
501: VSLRKACHEK DQTLKDKEDA IEMLAKKVDT LHKAKEVEAK KKRQEIAALE KKFAAVCLEQ ERLGNLRGPG TSQTVSGRTA SRGGLTRNLQ
101: SLLESKNLEL KKTNDEKKAA LAAQFAAEAT LRRVHAAQKD DDMPPIEAIL APLEAELKLS RKEIAKLQDD NRALDRLTKQ KEAALLEAER TVQIAMAKAA
201: MVDDMQNKNQ ELMKQIEICQ EENKILDRLH RQKVAEVEKL SQTVRELEED VLQGGATANV VRDYQRKVQE MNEEKKIRDR ELARAKVTAN RVAVVVANEW
301: KDANDKVMPV KQWLEERRFL QGEMQQLRDK LAIAERTARS EAQLKEKLQL RLKVLEEGLR GPPSGSSRPP MEGKSLSNGP PRRLSLGGVD SISKISPNGV
401: LMRRSPSFNS RSSLSTSSCL VLKHAKGTSK SFDGGTRSLD RGKVLGSGPH SLNRSTDAVK DCETADNWKA NAEEKSNEIT NNDSADMVSG VLYDVLQKEV
501: VSLRKACHEK DQTLKDKEDA IEMLAKKVDT LHKAKEVEAK KKRQEIAALE KKFAAVCLEQ ERLGNLRGPG TSQTVSGRTA SRGGLTRNLQ
001: MSDVSGDGDL SATVTEHEVT PQPPVSSATY PSLTVSASYK ESSGGKSSSK RRPIRPSFDA AADNEFITLL HGSDPVKVEL NRLENEVRDK DRELGEANAE
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
101: IKALRLSERQ REKAVEELTE ELTKLDEKLK LTESILESKN LEIKKINEEK KASMAAQFAA EATLRRVHAA QKDDDMPPIE AILAPLEAEL KLARSEIGKL
201: QEDNRALDRL TKSKEAALLE AERTVEAAMA KAAMVDDLQN KNQELMKQIE ICQEENKILD RMHRQKVAEV EKLTQTVREL EEAVLAGGAA ANAVRDYQRK
301: FQEMNEERKT LDRELARAKV TANRVATVVA NEWKDGNDKV MPVKQWLEER RFLQGEMQQL RDKLAITDRA AKSEAQLKEK FQLRLKVLEE TLRGTSSSAT
401: RNTPEARSMS NGPSRRQSLG GAENLQKFTS NGALSKKAPA SQMRHSLSIN STSVLKNAKG TSKSFDGGTR SVDRGKALLN GPGNYSFNKA TDDSKEAESG
501: NGWKENSEEK PQSEDPEAAT EDSVPGVLYD LLQKEVVSLR KASNEKDQSL KDKDDAIEML AKKVETLTKA MEVEAKKMRR EVAAMEKEVA AMRVEKDQDA
601: RAKRFSNSKS PSNTAQILAG RAAGRSGGLT KSTQ
Arabidopsis Description
ATMAP70-2microtubule-associated proteins 70-2 [Source:TAIR;Acc:AT1G24764]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.