Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
HORVU0Hr1G017080.1 | |
HORVU6Hr1G036020.1 | |
HORVU7Hr1G000780.1 | |
HORVU7Hr1G041170.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3B01G475100.1 | Wheat | cytosol | 69.48 | 89.54 |
TraesCS3D01G433800.1 | Wheat | cytosol | 68.83 | 88.33 |
TraesCS3A01G441100.2 | Wheat | cytosol | 68.83 | 88.33 |
Os01t0926800-01 | Rice | cytosol, mitochondrion | 58.44 | 72.87 |
Zm00001d042274_P001 | Maize | cytosol | 57.79 | 70.92 |
EES02004 | Sorghum | cytosol | 56.49 | 70.73 |
Zm00001d042275_P001 | Maize | cytosol | 54.55 | 66.93 |
EES02002 | Sorghum | cytosol | 55.19 | 66.67 |
HORVU3Hr1G096290.4 | Barley | plastid | 69.81 | 61.08 |
HORVU5Hr1G122080.1 | Barley | cytosol | 43.51 | 54.25 |
HORVU5Hr1G121940.5 | Barley | cytosol | 42.86 | 53.01 |
GSMUA_Achr4P15920_001 | Banana | cytosol | 41.23 | 48.29 |
Bra032645.1-P | Field mustard | cytosol | 34.42 | 45.89 |
KRH41051 | Soybean | cytosol | 36.69 | 45.56 |
AT1G01630.1 | Thale cress | cytosol | 37.01 | 44.71 |
VIT_17s0000g00130.t01 | Wine grape | cytosol | 37.01 | 44.53 |
Bra033247.1-P | Field mustard | cytosol | 36.69 | 44.31 |
CDX90047 | Canola | cytosol | 36.69 | 44.31 |
VIT_01s0150g00170.t01 | Wine grape | cytosol | 35.39 | 44.31 |
CDY15164 | Canola | cytosol | 36.04 | 43.53 |
KRH54081 | Soybean | cytosol | 37.34 | 43.4 |
HORVU5Hr1G121860.2 | Barley | plastid | 46.75 | 42.6 |
KRH63881 | Soybean | cytosol | 36.36 | 42.42 |
CDY38020 | Canola | cytosol | 35.71 | 41.98 |
PGSC0003DMT400036745 | Potato | cytosol | 35.71 | 40.59 |
Solyc03g118150.2.1 | Tomato | cytosol | 35.71 | 40.59 |
KRH59732 | Soybean | endoplasmic reticulum, golgi | 33.12 | 35.66 |
Solyc06g068800.2.1 | Tomato | cytosol | 34.09 | 33.98 |
PGSC0003DMT400065724 | Potato | cytosol | 33.77 | 33.66 |
Zm00001d009968_P001 | Maize | cytosol | 32.14 | 31.73 |
Zm00001d034765_P001 | Maize | cytosol | 28.25 | 30.53 |
HORVU4Hr1G005090.2 | Barley | cytosol | 10.06 | 23.85 |
HORVU4Hr1G074380.1 | Barley | cytosol | 10.71 | 23.74 |
HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 10.06 | 22.3 |
HORVU5Hr1G114590.3 | Barley | mitochondrion | 8.77 | 22.13 |
HORVU4Hr1G009310.1 | Barley | cytosol | 20.78 | 21.92 |
HORVU4Hr1G009210.2 | Barley | cytosol | 20.78 | 21.92 |
HORVU0Hr1G022240.10 | Barley | mitochondrion | 18.51 | 21.76 |
HORVU4Hr1G009190.1 | Barley | cytosol | 20.13 | 21.23 |
HORVU7Hr1G021120.1 | Barley | cytosol | 18.83 | 20.57 |
HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 10.39 | 20.51 |
HORVU5Hr1G020290.3 | Barley | plastid | 10.06 | 20.26 |
HORVU3Hr1G037050.3 | Barley | nucleus | 20.78 | 19.69 |
HORVU6Hr1G075070.1 | Barley | nucleus | 19.16 | 14.64 |
HORVU4Hr1G067410.4 | Barley | plastid | 18.18 | 11.22 |
Protein Annotations
EnsemblPlants:HORVU3Hr1G096280.6 | EnsemblPlantsGene:HORVU3Hr1G096280 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom_sf |
InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF158 | PFAM:PF00650 | PFscan:PS50191 |
SEG:seg | SMART:SM00516 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI000B47A9A8 | UniProt:A0A287MEK8 |
MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:652494086..652496683
Molecular Weight (calculated)
34558.1 Da
IEP (calculated)
10.145
GRAVY (calculated)
-0.296
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: QPTRPTTSRG TENHCALSSR SYSTGLAAWP NKVKHVLHTS PRQGLLRAPQ VLTVPVRRRG AAGEERRSMA SSVGGDAGEG EWLKVTELRA MAEAQDPHVK
101: EVDNLTLRRF LRARGHVVGK ASAMLLKFMA WRREAVPGGV MPPELVRTEL SREMASLGGV DRSGRPVLLA FPAKHFSANR DMAGFKRYIV YLLDSICAKI
201: PRGRQEKFLC IVDLKGWGYA NCDVRAYIAA IEIMQSYYPE RLGKALMIHV PYLFMKAWKM VQPFIDANTK DKFVFVDDKS LEETLRREMD DGQLPEMYGG
301: KLAIVPLE
101: EVDNLTLRRF LRARGHVVGK ASAMLLKFMA WRREAVPGGV MPPELVRTEL SREMASLGGV DRSGRPVLLA FPAKHFSANR DMAGFKRYIV YLLDSICAKI
201: PRGRQEKFLC IVDLKGWGYA NCDVRAYIAA IEIMQSYYPE RLGKALMIHV PYLFMKAWKM VQPFIDANTK DKFVFVDDKS LEETLRREMD DGQLPEMYGG
301: KLAIVPLE
001: MEESQELALT QLRKSVEKLS SSTEGYDKPT LMRFLVARSM DPVKAAKMFV DWQKWRASMV PPTGFIPESE VQDELEFRKV CLQGPTKSGH PLVLVITSKH
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
Arabidopsis Description
AT1G14820 protein [Source:UniProtKB/TrEMBL;Acc:B9DGS8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.