Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • cytosol 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G475100.1 Wheat cytosol 69.48 89.54
TraesCS3D01G433800.1 Wheat cytosol 68.83 88.33
TraesCS3A01G441100.2 Wheat cytosol 68.83 88.33
Os01t0926800-01 Rice cytosol, mitochondrion 58.44 72.87
Zm00001d042274_P001 Maize cytosol 57.79 70.92
EES02004 Sorghum cytosol 56.49 70.73
Zm00001d042275_P001 Maize cytosol 54.55 66.93
EES02002 Sorghum cytosol 55.19 66.67
HORVU3Hr1G096290.4 Barley plastid 69.81 61.08
HORVU5Hr1G122080.1 Barley cytosol 43.51 54.25
HORVU5Hr1G121940.5 Barley cytosol 42.86 53.01
GSMUA_Achr4P15920_001 Banana cytosol 41.23 48.29
Bra032645.1-P Field mustard cytosol 34.42 45.89
KRH41051 Soybean cytosol 36.69 45.56
AT1G01630.1 Thale cress cytosol 37.01 44.71
VIT_17s0000g00130.t01 Wine grape cytosol 37.01 44.53
Bra033247.1-P Field mustard cytosol 36.69 44.31
CDX90047 Canola cytosol 36.69 44.31
VIT_01s0150g00170.t01 Wine grape cytosol 35.39 44.31
CDY15164 Canola cytosol 36.04 43.53
KRH54081 Soybean cytosol 37.34 43.4
HORVU5Hr1G121860.2 Barley plastid 46.75 42.6
KRH63881 Soybean cytosol 36.36 42.42
CDY38020 Canola cytosol 35.71 41.98
PGSC0003DMT400036745 Potato cytosol 35.71 40.59
Solyc03g118150.2.1 Tomato cytosol 35.71 40.59
KRH59732 Soybean endoplasmic reticulum, golgi 33.12 35.66
Solyc06g068800.2.1 Tomato cytosol 34.09 33.98
PGSC0003DMT400065724 Potato cytosol 33.77 33.66
Zm00001d009968_P001 Maize cytosol 32.14 31.73
Zm00001d034765_P001 Maize cytosol 28.25 30.53
HORVU4Hr1G005090.2 Barley cytosol 10.06 23.85
HORVU4Hr1G074380.1 Barley cytosol 10.71 23.74
HORVU6Hr1G021650.1 Barley cytosol, mitochondrion, nucleus 10.06 22.3
HORVU5Hr1G114590.3 Barley mitochondrion 8.77 22.13
HORVU4Hr1G009310.1 Barley cytosol 20.78 21.92
HORVU4Hr1G009210.2 Barley cytosol 20.78 21.92
HORVU0Hr1G022240.10 Barley mitochondrion 18.51 21.76
HORVU4Hr1G009190.1 Barley cytosol 20.13 21.23
HORVU7Hr1G021120.1 Barley cytosol 18.83 20.57
HORVU3Hr1G080050.1 Barley cytosol, mitochondrion, plastid 10.39 20.51
HORVU5Hr1G020290.3 Barley plastid 10.06 20.26
HORVU3Hr1G037050.3 Barley nucleus 20.78 19.69
HORVU6Hr1G075070.1 Barley nucleus 19.16 14.64
HORVU4Hr1G067410.4 Barley plastid 18.18 11.22
Protein Annotations
EnsemblPlants:HORVU3Hr1G096280.6EnsemblPlantsGene:HORVU3Hr1G096280Gene3D:3.40.525.10InterPro:CRAL-TRIO_domInterPro:CRAL-TRIO_dom_sfInterPro:CRAL/TRIO_N_dom_sf
InterPro:IPR001251InterPro:IPR036865PANTHER:PTHR10174PANTHER:PTHR10174:SF158PFAM:PF00650PFscan:PS50191
SEG:segSMART:SM00516SUPFAM:SSF46938SUPFAM:SSF52087UniParc:UPI000B47A9A8UniProt:A0A287MEK8
MapMan:35.2:::::
Description
No Description!
Coordinates
chrchr3H:-:652494086..652496683
Molecular Weight (calculated)
34558.1 Da
IEP (calculated)
10.145
GRAVY (calculated)
-0.296
Length
308 amino acids
Sequence
(BLAST)
001: QPTRPTTSRG TENHCALSSR SYSTGLAAWP NKVKHVLHTS PRQGLLRAPQ VLTVPVRRRG AAGEERRSMA SSVGGDAGEG EWLKVTELRA MAEAQDPHVK
101: EVDNLTLRRF LRARGHVVGK ASAMLLKFMA WRREAVPGGV MPPELVRTEL SREMASLGGV DRSGRPVLLA FPAKHFSANR DMAGFKRYIV YLLDSICAKI
201: PRGRQEKFLC IVDLKGWGYA NCDVRAYIAA IEIMQSYYPE RLGKALMIHV PYLFMKAWKM VQPFIDANTK DKFVFVDDKS LEETLRREMD DGQLPEMYGG
301: KLAIVPLE
Best Arabidopsis Sequence Match ( AT1G14820.3 )
(BLAST)
001: MEESQELALT QLRKSVEKLS SSTEGYDKPT LMRFLVARSM DPVKAAKMFV DWQKWRASMV PPTGFIPESE VQDELEFRKV CLQGPTKSGH PLVLVITSKH
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
Arabidopsis Description
AT1G14820 protein [Source:UniProtKB/TrEMBL;Acc:B9DGS8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.