Factsheet for HORVU3Hr1G037050.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 1
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G211200.1	Wheat	nucleus	90.77	97.68
TraesCS3D01G186000.2	Wheat	nucleus	90.77	97.36
TraesCS3A01G181100.2	Wheat	nucleus	90.15	96.7
EES02732	Sorghum	cytosol	75.38	77.53
Zm00001d040360_P001	Maize	cytosol	74.46	76.58
Os01t0264700-01	Rice	cytosol	72.92	76.21
GSMUA_Achr8P01630_001	Banana	cytosol	54.46	50.86
GSMUA_Achr10P...	Banana	nucleus	55.38	47.24
HORVU7Hr1G021120.1	Barley	cytosol	40.31	46.45
GSMUA_Achr9P17070_001	Banana	cytosol	55.08	43.24
HORVU4Hr1G074380.1	Barley	cytosol	17.54	41.01
HORVU6Hr1G021650.1	Barley	cytosol, mitochondrion, nucleus	17.23	40.29
HORVU4Hr1G005090.2	Barley	cytosol	16.0	40.0
HORVU4Hr1G009190.1	Barley	cytosol	35.38	39.38
HORVU5Hr1G114590.3	Barley	mitochondrion	14.77	39.34
HORVU4Hr1G009210.2	Barley	cytosol	35.08	39.04
HORVU4Hr1G009310.1	Barley	cytosol	33.85	37.67
HORVU5Hr1G020290.3	Barley	plastid	17.54	37.25
HORVU3Hr1G080050.1	Barley	cytosol, mitochondrion, plastid	17.85	37.18
HORVU6Hr1G075070.1	Barley	nucleus	43.38	34.99
HORVU5Hr1G121940.5	Barley	cytosol	22.46	29.32
HORVU5Hr1G122080.1	Barley	cytosol	19.69	25.91
HORVU0Hr1G022240.10	Barley	mitochondrion	17.54	21.76
HORVU3Hr1G096280.6	Barley	plastid	19.69	20.78
HORVU5Hr1G121860.2	Barley	plastid	20.62	19.82
HORVU3Hr1G096290.4	Barley	plastid	18.77	17.33
HORVU4Hr1G067410.4	Barley	plastid	16.0	10.42

Protein Annotations

EnsemblPlants:HORVU3Hr1G037050.3	EnsemblPlantsGene:HORVU3Hr1G037050	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF159	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	PRINTS:PR00180	SEG:seg	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000B484220	UniProt:A0A287KSE7	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr3H:+:209725356..209728271

Molecular Weight (calculated)

37155.0 Da

IEP (calculated)

7.492

GRAVY (calculated)

-0.628

Length

325 amino acids

Sequence
(BLAST)

001: MRSHSCDNIF CRCFSYISDS RPPLVSKMSF LWKSSNGGTT EKTLTLEEQQ EKINEVRKQL EEPSSLAIQG FLSDASILRF LRARNWNVQK SSKMLKSAVK
101: WRAAYKPEMI SWEEIAHEAE TGKIYRADYK DKLGRTVLVL RPGLENTTSG KEQIKYLVYS LEKAIMNLTD DQEKMVWMID FQGWTMGSTP LKVTRETVSV
201: LQDCYPERLG LAILYNPPRL FESFYKIVKP FLDHETSKKV KFVYSNDKES QKIMADVFDM DKLDSAFGGR NLATFEYSSY AEQMKEDDKK MQSNDAASDA
301: SSEASFYSGT DSPKHGDGEH GAKKA

Best Arabidopsis Sequence Match ( AT1G22180.2 )
(BLAST)

001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT

Arabidopsis Description

F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.