Factsheet for TraesCS3D01G186000.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G211200.1	Wheat	nucleus	98.68	99.01
TraesCS3A01G181100.2	Wheat	nucleus	98.35	98.35
HORVU3Hr1G037050.3	Barley	nucleus	97.36	90.77
EES02732	Sorghum	cytosol	80.86	77.53
Zm00001d040360_P001	Maize	cytosol	79.87	76.58
Os01t0264700-01	Rice	cytosol	77.89	75.88
GSMUA_Achr8P01630_001	Banana	cytosol	57.76	50.29
GSMUA_Achr10P...	Banana	nucleus	58.75	46.72
TraesCS3D01G453300.2	Wheat	cytosol, mitochondrion, nucleus, plastid	42.9	46.59
TraesCS7D01G090800.1	Wheat	cytosol	40.92	43.82
GSMUA_Achr9P17070_001	Banana	cytosol	57.76	42.27
TraesCS4D01G055200.1	Wheat	cytosol	37.95	39.38
TraesCS4D01G055300.1	Wheat	cytosol	37.29	38.7
TraesCS4D01G055100.1	Wheat	cytosol	26.4	38.28
TraesCS4D01G055400.1	Wheat	cytosol	36.3	37.67
TraesCS6D01G281700.1	Wheat	nucleus	45.54	35.11
TraesCS5D01G538600.1	Wheat	cytosol	24.09	30.17
TraesCS5D01G538500.1	Wheat	cytosol	22.11	27.35
TraesCS5D01G538300.1	Wheat	cytosol	22.11	26.27
TraesCS3D01G433800.1	Wheat	cytosol	20.79	26.25
TraesCS3D01G433700.1	Wheat	cytosol	19.8	24.1
TraesCS5D01G538700.1	Wheat	cytosol	22.11	21.2
TraesCS7D01G448500.3	Wheat	mitochondrion, plastid	19.8	19.35
TraesCS4D01G242900.1	Wheat	cytosol	20.79	14.03

Protein Annotations

EnsemblPlants:TraesCS3D01G186000.2	EnsemblPlantsGene:TraesCS3D01G186000	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF159	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	PRINTS:PR00180	SEG:seg	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	TIGR:cd00170	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr3D:-:171331744..171335117

Molecular Weight (calculated)

34500.8 Da

IEP (calculated)

6.183

GRAVY (calculated)

-0.645

Length

303 amino acids

Sequence
(BLAST)

001: MSFLWKSSNG GTTEKTLTLE EQQEKQINEV RKQLEEPSSL AIQGFLSDAS ILRFLRARNW NVQKSSKMLK SAVKWRAAYK PEMISWEEIA HEAETGKIYR
101: ADYKDTLGRT VLVLRPGLEN TTSGKEQIKY LVYSLEKAIM NLTDDQEKMV WMIDFQGWTM GSTPLKVTRE TVSVLQDCYP ERLGLAILYN PPRLFESFYK
201: IVKPFLDHET SKKVKFVYSN DKESQKIMAE VFDMDKLDSA FGGRNLATFE YSSYAEQMKE DDKKMQSNDA GSDASSEASF YSGTDSPKHG DGEHGATKKA
301: CAT

Best Arabidopsis Sequence Match ( AT1G22180.2 )
(BLAST)

001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT

Arabidopsis Description

F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.