Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G259600.1 | Wheat | cytosol | 97.26 | 97.26 |
| TraesCS4B01G055100.1 | Wheat | cytosol | 91.1 | 93.99 |
| HORVU4Hr1G009190.1 | Barley | cytosol | 90.75 | 90.75 |
| TraesCS4D01G055200.1 | Wheat | cytosol | 85.62 | 85.62 |
| TraesCS4D01G055400.1 | Wheat | cytosol | 83.9 | 83.9 |
| TraesCS4D01G055100.1 | Wheat | cytosol | 57.88 | 80.86 |
| Os03t0724100-01 | Rice | cytosol | 75.68 | 73.91 |
| EER93541 | Sorghum | cytosol | 73.63 | 72.39 |
| KXG37682 | Sorghum | cytosol | 69.52 | 69.28 |
| Zm00001d033836_P001 | Maize | nucleus | 68.15 | 67.46 |
| KXG37681 | Sorghum | cytosol | 66.1 | 62.46 |
| Zm00001d033837_P001 | Maize | plastid | 59.93 | 58.72 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 55.48 | 57.86 |
| GSMUA_AchrUn_... | Banana | cytosol | 55.82 | 57.19 |
| VIT_04s0023g01720.t01 | Wine grape | cytosol, mitochondrion | 54.11 | 54.48 |
| PGSC0003DMT400038571 | Potato | cytosol | 49.66 | 54.1 |
| KRH15219 | Soybean | cytosol | 51.37 | 52.45 |
| Solyc02g085300.2.1 | Tomato | cytosol | 38.36 | 51.85 |
| KRH51858 | Soybean | nucleus, plastid | 35.96 | 51.72 |
| CDX73146 | Canola | cytosol | 50.68 | 51.21 |
| KRH05807 | Soybean | cytosol | 51.03 | 50.85 |
| KRH61179 | Soybean | cytosol | 31.51 | 50.83 |
| KRH08288 | Soybean | cytosol | 51.37 | 50.68 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 51.37 | 50.51 |
| AT1G75170.1 | Thale cress | cytosol | 50.68 | 50.0 |
| KRH69927 | Soybean | cytosol | 50.68 | 50.0 |
| CDY24776 | Canola | cytosol | 50.0 | 49.83 |
| Bra010566.1-P | Field mustard | cytosol | 50.0 | 49.83 |
| Bra011696.1-P | Field mustard | nucleus | 48.97 | 49.31 |
| PGSC0003DMT400013200 | Potato | cytosol | 48.29 | 49.13 |
| Solyc12g089130.1.1 | Tomato | cytosol | 39.04 | 48.93 |
| CDY35466 | Canola | cytosol | 48.97 | 48.81 |
| Solyc04g080290.2.1 | Tomato | cytosol | 47.6 | 48.43 |
| VIT_18s0001g12420.t01 | Wine grape | cytosol | 52.05 | 48.25 |
| CDY65854 | Canola | nucleus | 47.6 | 48.1 |
| AT4G36640.3 | Thale cress | cytosol | 47.6 | 47.28 |
| CDY42697 | Canola | cytosol | 46.58 | 47.06 |
| CDX72592 | Canola | cytosol | 46.23 | 46.71 |
| Bra017768.1-P | Field mustard | cytosol | 46.23 | 46.71 |
| CDX75583 | Canola | cytosol | 24.66 | 45.86 |
| Bra015863.1-P | Field mustard | cytosol | 50.68 | 38.54 |
| CDY45413 | Canola | cytosol | 50.68 | 38.44 |
| TraesCS3D01G186000.2 | Wheat | nucleus | 38.7 | 37.29 |
| TraesCS3D01G453300.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 30.82 | 32.26 |
| TraesCS7D01G090800.1 | Wheat | cytosol | 28.77 | 29.68 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 39.38 | 29.26 |
| TraesCS5D01G538600.1 | Wheat | cytosol | 22.6 | 27.27 |
| TraesCS5D01G538500.1 | Wheat | cytosol | 22.26 | 26.53 |
| TraesCS5D01G538300.1 | Wheat | cytosol | 22.95 | 26.27 |
| TraesCS3D01G433800.1 | Wheat | cytosol | 21.58 | 26.25 |
| TraesCS3D01G433700.1 | Wheat | cytosol | 21.92 | 25.7 |
| TraesCS5D01G538700.1 | Wheat | cytosol | 21.92 | 20.25 |
| TraesCS7D01G448500.3 | Wheat | mitochondrion, plastid | 18.15 | 17.1 |
| TraesCS4D01G242900.1 | Wheat | cytosol | 23.29 | 15.14 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G055300.1 | EnsemblPlantsGene:TraesCS4D01G055300 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF206 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | PRINTS:PR00180 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | TIGR:cd00170 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr4D:+:30499780..30504843
Molecular Weight (calculated)
33509.9 Da
IEP (calculated)
8.715
GRAVY (calculated)
-0.561
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRKKQASHF DSDDAEQRQA KIKELRAALG PLSGRGEKYC DEACLIRYLD ARNWNVDKSR KMLKESLKWR ATKRPEDIRW PDVSVEAETG KMYRATFTDR
101: EGRTVVVMRP AKQNTSSHEG QLQYLIYTLE NAVLSLPEGH DKMVWLIDFT GWTLAHATPF KTARDCMNVL QNHYPERLSI AFLFNPPKVF EASFKVLKVL
201: VDPKSAQKLN FVYKENDESM KTMYNHIDPE VLPVEFGGKN NAVYNHEDYS KLMTKDDIKT ASFWAADVNH VVSVDSVPEV KPQSSLIVAK AS
101: EGRTVVVMRP AKQNTSSHEG QLQYLIYTLE NAVLSLPEGH DKMVWLIDFT GWTLAHATPF KTARDCMNVL QNHYPERLSI AFLFNPPKVF EASFKVLKVL
201: VDPKSAQKLN FVYKENDESM KTMYNHIDPE VLPVEFGGKN NAVYNHEDYS KLMTKDDIKT ASFWAADVNH VVSVDSVPEV KPQSSLIVAK AS
001: MFRRRNAHQL DNDDSQQDNK VRELKSAIGP LSGHSLVFCS DASLRRFLDA RNWDVEKAKK MIQETLKWRS TYKPQEIRWN QVAHEGETGK ASRASFHDRQ
101: GRVVLIMRPA MQNSTSQEGN IRHLVYLLEN AIINLPKGQK QMSWLIDFTG WSMAVNPPMK TTREIIHILQ NYYPERLGIA FLYNPPRLFQ AVYRAAKYFL
201: DPRTAEKVKF VYPKDKASDE LMTTHFDVEN LPKEFGGEAT LEYDHEDFSR QMYEDDLKTA KYWGLEGKHY PKTNGFSPSD VVPEPAIEIA SAAS
101: GRVVLIMRPA MQNSTSQEGN IRHLVYLLEN AIINLPKGQK QMSWLIDFTG WSMAVNPPMK TTREIIHILQ NYYPERLGIA FLYNPPRLFQ AVYRAAKYFL
201: DPRTAEKVKF VYPKDKASDE LMTTHFDVEN LPKEFGGEAT LEYDHEDFSR QMYEDDLKTA KYWGLEGKHY PKTNGFSPSD VVPEPAIEIA SAAS
Arabidopsis Description
At4g36640 [Source:UniProtKB/TrEMBL;Acc:O23217]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.