Factsheet for TraesCS7D01G448500.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G460600.1	Wheat	mitochondrion, plastid	81.29	96.18
HORVU0Hr1G022240.10	Barley	mitochondrion	80.97	95.8
TraesCS7B01G361800.2	Wheat	mitochondrion, plastid	94.19	95.42
Os02t0321500-01	Rice	mitochondrion	73.23	86.97
KXG19106	Sorghum	plastid	68.06	82.42
Zm00001d045573_P004	Maize	plastid	38.71	74.53
GSMUA_Achr3P14480_001	Banana	mitochondrion	57.1	67.56
Solyc03g112640.2.1	Tomato	plastid	54.52	64.5
PGSC0003DMT400046785	Potato	mitochondrion	53.55	63.36
KRH03256	Soybean	endoplasmic reticulum, plastid	52.26	61.83
KRH57102	Soybean	cytosol, plastid	52.26	61.83
VIT_17s0000g08850.t01	Wine grape	mitochondrion	51.29	61.15
AT5G63060.1	Thale cress	plastid	50.97	60.08
CDY16746	Canola	plastid	49.03	59.84
CDX87279	Canola	plastid	49.03	59.84
Bra035864.1-P	Field mustard	plastid	49.03	59.84
Zm00001d045574_P002	Maize	plastid	66.77	40.27
TraesCS3D01G433700.1	Wheat	cytosol	20.32	25.3
TraesCS3D01G433800.1	Wheat	cytosol	18.39	23.75
TraesCS5D01G538500.1	Wheat	cytosol	18.06	22.86
TraesCS5D01G538600.1	Wheat	cytosol	17.74	22.73
TraesCS5D01G538300.1	Wheat	cytosol	16.45	20.0
TraesCS3D01G186000.2	Wheat	nucleus	19.35	19.8
TraesCS3D01G453300.2	Wheat	cytosol, mitochondrion, nucleus, plastid	17.42	19.35
TraesCS4D01G055300.1	Wheat	cytosol	17.1	18.15
TraesCS4D01G055100.1	Wheat	cytosol	11.94	17.7
TraesCS7D01G090800.1	Wheat	cytosol	16.13	17.67
TraesCS4D01G055200.1	Wheat	cytosol	16.45	17.47
TraesCS4D01G055400.1	Wheat	cytosol	15.81	16.78
TraesCS5D01G538700.1	Wheat	cytosol	16.45	16.14
TraesCS6D01G281700.1	Wheat	nucleus	20.32	16.03
TraesCS4D01G242900.1	Wheat	cytosol	15.48	10.69

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.2	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:IPR001251
InterPro:IPR036865	PFAM:PF00650	PFscan:PS50191	PANTHER:PTHR10174	PANTHER:PTHR10174:SF197	SMART:SM00516
SUPFAM:SSF46938	SUPFAM:SSF52087	EnsemblPlantsGene:TraesCS7D01G448500	EnsemblPlants:TraesCS7D01G448500.3	TIGR:cd00170	SEG:seg

Description

No Description!

Coordinates

chr7D:+:568363480..568367066

Molecular Weight (calculated)

34639.8 Da

IEP (calculated)

8.682

GRAVY (calculated)

-0.105

Length

310 amino acids

Sequence
(BLAST)

001: MAASCSFRSV VRAPPPPRGL AGARRAVRCC SSAAPTGAST SKVSTPAPNH VFGSRLGVSS INPFAADLLY ASNSLEANPL GADLALALPL LVQLVLEVKE
101: RLEREHPGLP TGRSGRDDDE MILWFLKDRK FAVDEAVSKL AKAIKWRQDF RVSELSEESV KGLYQTGKAY VHHSFDINGR PVLVVVAAKH FPSKQDPLEN
201: EKLCAFLVEK ALRNLPMGTD NILGIFDLRG FGVENGDLQF LKFLIDVFYY YYPKRLGEVL FVDAPFVFQP MWQLVKPLLK QYASLVRFCD AETVRKEYFT
301: EETVPPDFRR

Best Arabidopsis Sequence Match ( AT5G63060.1 )
(BLAST)

001: MSIRFSSTIV AASVNFKSSK NLNINRSRNC RFSVRSCVSE SQHAHKLVLE VKERLAKDCT SLPLGKYGRD DEDMILWFLK DRRFSVDEAI GKLTKAIKWR
101: HEFKVDELSE DSIKAATDTG KAYVHGFLDV KGRPVVIVAP AKHIPGLLDP IEDEKLCVFL LEKALSKLPA GQHKILGIFD LRGFGSQNAD LKFLTFLFDV
201: FYYYYPSRLD EVLFVDAPFI FQPIWQFTKP LVKQYASLVK FCSAETVRKE YFTEETLPSN FRS

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4K975]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.