CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57102	Soybean	cytosol, plastid	93.89	93.89
VIT_17s0000g08850.t01	Wine grape	mitochondrion	67.56	68.08
PGSC0003DMT400046785	Potato	mitochondrion	64.89	64.89
Solyc03g112640.2.1	Tomato	plastid	63.74	63.74
Os02t0321500-01	Rice	mitochondrion	62.6	62.84
KXG19106	Sorghum	plastid	61.07	62.5
GSMUA_Achr3P14480_001	Banana	mitochondrion	61.83	61.83
HORVU0Hr1G022240.10	Barley	mitochondrion	61.83	61.83
TraesCS7A01G460600.1	Wheat	mitochondrion, plastid	61.83	61.83
AT5G63060.1	Thale cress	plastid	61.83	61.6
CDX87279	Canola	plastid	58.4	60.24
CDY16746	Canola	plastid	58.02	59.84
Bra035864.1-P	Field mustard	plastid	58.02	59.84
Zm00001d045573_P004	Maize	plastid	34.35	55.9
TraesCS7B01G361800.2	Wheat	mitochondrion, plastid	61.45	52.61
TraesCS7D01G448500.3	Wheat	mitochondrion, plastid	61.83	52.26
Zm00001d045574_P002	Maize	plastid	60.31	30.74
KRH41051	Soybean	cytosol	21.37	22.58
KRH54081	Soybean	cytosol	22.52	22.26
KRH51858	Soybean	nucleus, plastid	17.18	22.17
KRH63881	Soybean	cytosol	21.76	21.59
KRH59732	Soybean	endoplasmic reticulum, golgi	21.76	19.93
KRH15219	Soybean	cytosol	21.76	19.93
KRH61179	Soybean	cytosol	13.74	19.89
KRH05807	Soybean	cytosol	21.76	19.45
KRH70361	Soybean	cytosol	17.94	19.03
KRH53100	Soybean	cytosol	19.85	18.98
KRH69927	Soybean	cytosol	21.37	18.92
KRH64923	Soybean	nucleus	20.23	18.6
KRH62380	Soybean	cytosol	19.08	18.25
KRH08288	Soybean	cytosol	20.23	17.91
KRH16691	Soybean	cytosol	22.14	17.47
KRH18888	Soybean	cytosol	21.76	17.12
KRH62383	Soybean	cytosol	21.37	16.33
KRG91288	Soybean	cytosol	19.47	12.62
KRH35529	Soybean	cytosol	19.08	12.38

Protein Annotations

EMBL:ACUP02010341	EnsemblPlants:KRH03256	EnsemblPlantsGene:GLYMA_17G087400	EntrezGene:100779135	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF197
PFAM:PF00650	PFscan:PS50191	ProteinID:KRH03256	ProteinID:KRH03256.1	SEG:seg	SMART:SM00516
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000233F1EC	UniProt:K7MKP1	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr17:+:6766929..6770143

Molecular Weight (calculated)

30218.9 Da

IEP (calculated)

9.415

GRAVY (calculated)

-0.106

Length

262 amino acids

Sequence
(BLAST)

001: MVLMRTVYPT IAVPLPLPLS NLPVRTNFAV RCANVHSQTQ LDSRKLVLAV KEKLEKEHHN LPVGRNGRDD EDMILWFLKD RKFSIDDAIY KLTKAIKWRR
101: DFEVSKLTEE VVKDALQTGK GYVHDLLDIN GRPVVVVVGS KHIPQALDPA DDERLCVFLI EKALSKLPTG KEQILTIVDL RGFSTENADL KFLTFLFDVF
201: YYYYPKRLAQ VLFVDAPFVF KPIWQLVKPL LKSYASLVRF CSAETVRKEY FTDKTLPPSF RD

Best Arabidopsis Sequence Match ( AT5G63060.1 )
(BLAST)

001: MSIRFSSTIV AASVNFKSSK NLNINRSRNC RFSVRSCVSE SQHAHKLVLE VKERLAKDCT SLPLGKYGRD DEDMILWFLK DRRFSVDEAI GKLTKAIKWR
101: HEFKVDELSE DSIKAATDTG KAYVHGFLDV KGRPVVIVAP AKHIPGLLDP IEDEKLCVFL LEKALSKLPA GQHKILGIFD LRGFGSQNAD LKFLTFLFDV
201: FYYYYPSRLD EVLFVDAPFI FQPIWQFTKP LVKQYASLVK FCSAETVRKE YFTEETLPSN FRS

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4K975]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.