CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045573_P004	Maize	plastid	56.25	89.44
Os02t0321500-01	Rice	mitochondrion	83.59	81.99
TraesCS7A01G460600.1	Wheat	mitochondrion, plastid	81.25	79.39
HORVU0Hr1G022240.10	Barley	mitochondrion	81.25	79.39
TraesCS7B01G361800.2	Wheat	mitochondrion, plastid	82.42	68.95
TraesCS7D01G448500.3	Wheat	mitochondrion, plastid	82.42	68.06
GSMUA_Achr3P14480_001	Banana	mitochondrion	67.97	66.41
Solyc03g112640.2.1	Tomato	plastid	64.45	62.98
VIT_17s0000g08850.t01	Wine grape	mitochondrion	62.11	61.15
PGSC0003DMT400046785	Potato	mitochondrion	62.5	61.07
KRH57102	Soybean	cytosol, plastid	62.5	61.07
KRH03256	Soybean	endoplasmic reticulum, plastid	62.5	61.07
AT5G63060.1	Thale cress	plastid	60.55	58.94
Bra035864.1-P	Field mustard	plastid	58.2	58.66
CDY16746	Canola	plastid	58.2	58.66
CDX87279	Canola	plastid	58.2	58.66
Zm00001d045574_P002	Maize	plastid	92.58	46.11
EES02004	Sorghum	cytosol	22.66	23.58
EES02002	Sorghum	cytosol	23.05	23.14
EER90511	Sorghum	cytosol	19.53	20.0
KXG37682	Sorghum	cytosol	21.09	18.43
EER93541	Sorghum	cytosol	21.09	18.18
EES02732	Sorghum	cytosol	22.27	18.04
EES05517	Sorghum	cytosol	23.83	17.43
EES17948	Sorghum	cytosol	17.58	16.67
KXG23351	Sorghum	cytosol	17.97	16.08
OQU79005	Sorghum	cytosol	18.36	15.82
KXG37681	Sorghum	cytosol	18.75	15.53
EER95261	Sorghum	cytosol	18.75	10.81

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.2	UniProt:A0A194YGL3	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536
InterPro:IPR001251	InterPro:IPR036865	EnsemblPlants:KXG19106	ProteinID:KXG19106	ProteinID:KXG19106.1	PFAM:PF00650
PFscan:PS50191	PANTHER:PTHR10174	PANTHER:PTHR10174:SF197	SMART:SM00516	EnsemblPlantsGene:SORBI_3010G005600	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI0001C80547	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:455106..458342

Molecular Weight (calculated)

29074.1 Da

IEP (calculated)

8.740

GRAVY (calculated)

-0.199

Length

256 amino acids

Sequence
(BLAST)

001: MMTASCYVCR SVVRAPPLKS RTAVRCQSAA PPGATSTSKL VLEVKERLAR EHPGLPTGRN GRDDDDMVLW FLKDRKFSVD EAVPKLTKAI KWRQEFGVSE
101: LSEESVKGLY QTGKAYVHDS LDVYGRPVLV VVAAKHFPST QDPVENQKLC AYLVEKAVSR LPSGAENILG IFDLRGFRVE NGDLQFLKFL IDVFYYYYPK
201: RLGQVLFVDA PFVFQPMWQV VKPLLKSYAS LVRFCDAETV RKEYFKEETV PPDFCN

Best Arabidopsis Sequence Match ( AT5G63060.1 )
(BLAST)

001: MSIRFSSTIV AASVNFKSSK NLNINRSRNC RFSVRSCVSE SQHAHKLVLE VKERLAKDCT SLPLGKYGRD DEDMILWFLK DRRFSVDEAI GKLTKAIKWR
101: HEFKVDELSE DSIKAATDTG KAYVHGFLDV KGRPVVIVAP AKHIPGLLDP IEDEKLCVFL LEKALSKLPA GQHKILGIFD LRGFGSQNAD LKFLTFLFDV
201: FYYYYPSRLD EVLFVDAPFI FQPIWQFTKP LVKQYASLVK FCSAETVRKE YFTEETLPSN FRS

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4K975]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.