Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES17948 | Sorghum | cytosol | 63.64 | 67.41 |
| Os05t0267800-01 | Rice | cytosol | 59.44 | 60.07 |
| TraesCS3D01G453300.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 57.69 | 59.14 |
| OQU79005 | Sorghum | cytosol | 61.19 | 58.92 |
| TraesCS7A01G094800.2 | Wheat | cytosol | 58.04 | 58.87 |
| TraesCS3B01G502500.1 | Wheat | cytosol, nucleus, plastid | 57.34 | 58.78 |
| TraesCS4A01G395100.1 | Wheat | cytosol | 57.69 | 58.72 |
| TraesCS3B01G500500.1 | Wheat | cytosol, nucleus, plastid | 56.99 | 58.42 |
| HORVU7Hr1G021120.1 | Barley | cytosol | 57.34 | 58.16 |
| TraesCS7D01G090800.1 | Wheat | cytosol | 56.99 | 57.6 |
| EES02732 | Sorghum | cytosol | 42.31 | 38.29 |
| GSMUA_Achr8P01630_001 | Banana | cytosol | 44.06 | 36.21 |
| KXG37681 | Sorghum | cytosol | 35.66 | 33.01 |
| GSMUA_Achr10P... | Banana | nucleus | 42.66 | 32.02 |
| KXG37682 | Sorghum | cytosol | 32.17 | 31.4 |
| EER93541 | Sorghum | cytosol | 32.52 | 31.31 |
| GSMUA_Achr9P17070_001 | Banana | cytosol | 44.76 | 30.92 |
| EES05517 | Sorghum | cytosol | 33.92 | 27.71 |
| EER90511 | Sorghum | cytosol | 20.63 | 23.6 |
| EES02002 | Sorghum | cytosol | 20.98 | 23.53 |
| EES02004 | Sorghum | cytosol | 19.93 | 23.17 |
| KXG19106 | Sorghum | plastid | 16.08 | 17.97 |
| EER95261 | Sorghum | cytosol | 16.43 | 10.59 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.2 | UniProt:A0A1B6PCG4 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | EnsemblPlants:KXG23351 | ProteinID:KXG23351 | ProteinID:KXG23351.1 |
| ProteinID:OQU79000.1 | PFAM:PF00650 | PFscan:PS50191 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF143 | SMART:SM00516 |
| SMART:SM01100 | EnsemblPlantsGene:SORBI_3008G086700 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0003C6B712 | SEG:seg |
Description
hypothetical protein
Coordinates
chr8:-:17599047..17607190
Molecular Weight (calculated)
33157.7 Da
IEP (calculated)
9.571
GRAVY (calculated)
-0.602
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSLLKTRNE GKQQKQASPQ EQQRKIDEVR ELLGDLPTEM PSFLSDGTIR RFLRAKNWSM EQATKALKEA VKWRRQYKPD KICWEDLASM ENEVRRAYIP
101: DYLDNNGRTV FAIMTSKKSL TSTKEHIKQL VYNLEILALS SKDAQEKNVV WICDFHGWTL STTPLWETRE SLHIIQNYYP GLIGAAILCN PPKIFESFWK
201: IVKHFIEPML YDKVKFVYSN NSDSQRILAD IFDLDKLEFA FGGRNTASLD ITKYSERMRR RDQIRGACKD ASGTISPSGQ RIQSTT
101: DYLDNNGRTV FAIMTSKKSL TSTKEHIKQL VYNLEILALS SKDAQEKNVV WICDFHGWTL STTPLWETRE SLHIIQNYYP GLIGAAILCN PPKIFESFWK
201: IVKHFIEPML YDKVKFVYSN NSDSQRILAD IFDLDKLEFA FGGRNTASLD ITKYSERMRR RDQIRGACKD ASGTISPSGQ RIQSTT
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.