CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052231_P003	Maize	cytosol	92.0	92.0
Os02t0752000-01	Rice	cytosol	74.0	68.52
TraesCS6D01G281700.1	Wheat	nucleus	76.86	68.45
HORVU6Hr1G075070.1	Barley	nucleus	77.71	67.49
TraesCS6A01G302200.1	Wheat	nucleus	76.86	66.75
TraesCS6B01G331400.1	Wheat	nucleus	76.57	66.5
CDY38239	Canola	cytosol	11.14	61.9
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	52.57	58.41
Bra012311.1-P	Field mustard	cytosol	48.86	56.07
CDY56380	Canola	cytosol	48.86	56.07
CDY00428	Canola	cytosol	48.0	55.08
KRH16691	Soybean	cytosol	51.14	53.92
GSMUA_Achr3P04420_001	Banana	cytosol	51.14	53.59
KRH18888	Soybean	cytosol	50.57	53.15
AT1G22180.4	Thale cress	cytosol	47.14	52.55
CDY21345	Canola	cytosol	48.0	52.17
Bra031370.1-P	Field mustard	cytosol	48.0	52.17
PGSC0003DMT400024527	Potato	cytosol	48.0	50.91
AT4G08690.2	Thale cress	cytosol	43.71	50.83
Bra000655.1-P	Field mustard	cytosol	44.57	50.49
CDX90694	Canola	cytosol	44.57	50.49
CDY38240	Canola	peroxisome	20.86	50.34
CDY05023	Canola	cytosol	45.14	50.32
KRH53100	Soybean	cytosol	38.86	49.63
Solyc04g072810.2.1	Tomato	cytosol	46.0	49.39
VIT_18s0001g05080.t01	Wine grape	nucleus	50.57	49.03
KRH62380	Soybean	cytosol	38.29	48.91
EES02732	Sorghum	cytosol	42.86	47.47
CDY12289	Canola	cytosol	28.57	47.39
KRH62383	Soybean	cytosol	41.71	42.57
EER93541	Sorghum	cytosol	32.57	38.38
KXG37682	Sorghum	cytosol	32.0	38.23
EES17948	Sorghum	cytosol	27.71	35.93
OQU79005	Sorghum	cytosol	28.86	34.01
KXG23351	Sorghum	cytosol	27.71	33.92
KXG37681	Sorghum	cytosol	29.43	33.33
EES02004	Sorghum	cytosol	18.0	25.61
EES02002	Sorghum	cytosol	18.0	24.71
KXG19106	Sorghum	plastid	17.43	23.83
EER90511	Sorghum	cytosol	15.71	22.0
EER95261	Sorghum	cytosol	18.0	14.19

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.2	EntrezGene:8075696	UniProt:C5XYP7	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	EnsemblPlants:EES05517	ProteinID:EES05517	ProteinID:EES05517.1	InterPro:IPR001251
InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR10174	PANTHER:PTHR10174:SF202
SMART:SM00516	SMART:SM01100	EnsemblPlantsGene:SORBI_3004G233900	SUPFAM:SSF46938	SUPFAM:SSF52087	unigene:Sbi.5111
UniParc:UPI0001A854A5	RefSeq:XP_002452541.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:58238876..58244059

Molecular Weight (calculated)

39550.8 Da

IEP (calculated)

5.608

GRAVY (calculated)

-0.677

Length

350 amino acids

Sequence
(BLAST)

001: MSSVSGTTNG HGKEAAFYEE QLSKIGKVRT DLGQLSGKSA LYCSDASIAR YLIARNWDVK KATRMLKKTL KWRSEYKPDE IRWDDISDEA VTGKTYRTDY
101: FDKIGRSILV MRPGCQNTKN PNGQVKYLVY CMENAILNLP HGQDQMVWLI DFAGFNLGNL SIQVTKMTAD VLQGHYPERL GVAILYNAPR FFEPFWKMAS
201: PLLEKKTRNK VKFVYSDRPD TMKIMEDLFN MDELECAFGG KNPATFNIND YAVRMREDDK KMPLFWSPEN SALASEPYLM SSQKALESIS GVKTEEAGSG
301: KRENLETAPE KSEESDTESE KEEQTRTESS TVEQKNLPGE ANAPADKSGV

Best Arabidopsis Sequence Match ( AT1G22180.4 )
(BLAST)

001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT

Arabidopsis Description

F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.