CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37682	Sorghum	cytosol	77.44	78.5
TraesCS4D01G055200.1	Wheat	cytosol	77.1	78.42
Os03t0724100-01	Rice	cytosol	78.11	77.59
TraesCS4B01G055000.1	Wheat	cytosol	76.09	77.4
TraesCS4A01G259700.1	Wheat	cytosol	76.09	77.4
HORVU4Hr1G074380.1	Barley	cytosol	36.03	76.98
Zm00001d033837_P001	Maize	plastid	77.1	76.85
HORVU4Hr1G009210.2	Barley	cytosol	75.08	76.37
TraesCS4B01G055100.1	Wheat	cytosol	71.72	75.27
TraesCS4A01G259600.1	Wheat	cytosol	73.74	75.0
TraesCS4D01G055400.1	Wheat	cytosol	73.06	74.32
TraesCS4A01G259500.1	Wheat	cytosol	72.39	73.63
TraesCS4D01G055300.1	Wheat	cytosol	72.39	73.63
TraesCS4D01G055100.1	Wheat	cytosol	51.52	73.21
HORVU4Hr1G009190.1	Barley	cytosol	71.72	72.95
KXG37681	Sorghum	cytosol	75.76	72.82
TraesCS4B01G055200.1	Wheat	cytosol	70.71	71.92
HORVU4Hr1G009310.1	Barley	cytosol	70.71	71.92
HORVU4Hr1G005090.2	Barley	cytosol	31.31	71.54
HORVU6Hr1G021650.1	Barley	cytosol, mitochondrion, nucleus	33.0	70.5
HORVU5Hr1G114590.3	Barley	mitochondrion	28.96	70.49
TraesCS7B01G089700.1	Wheat	cytosol	66.33	69.61
HORVU3Hr1G080050.1	Barley	cytosol, mitochondrion, plastid	33.67	64.1
HORVU5Hr1G020290.3	Barley	plastid	32.32	62.75
GSMUA_AchrUn_...	Banana	cytosol	58.25	60.7
GSMUA_Achr4P03190_001	Banana	cytosol	55.56	58.93
VIT_04s0023g01720.t01	Wine grape	cytosol, mitochondrion	56.23	57.59
KRH15219	Soybean	cytosol	54.21	56.29
CDX73146	Canola	cytosol	54.55	56.06
PGSC0003DMT400038571	Potato	cytosol	50.51	55.97
KRH61179	Soybean	cytosol	34.01	55.8
AT1G75170.1	Thale cress	cytosol	55.56	55.74
Solyc02g085300.2.1	Tomato	cytosol	40.4	55.56
Solyc12g089130.1.1	Tomato	cytosol	43.1	54.94
KRH69927	Soybean	cytosol	54.55	54.73
KRH08288	Soybean	cytosol	54.21	54.39
KRH05807	Soybean	cytosol	53.54	54.27
GSMUA_Achr8P26360_001	Banana	cytosol	54.21	54.21
KRH51858	Soybean	nucleus, plastid	37.04	54.19
PGSC0003DMT400013200	Potato	cytosol	51.85	53.66
Bra011696.1-P	Field mustard	nucleus	52.19	53.45
Solyc04g080290.2.1	Tomato	cytosol	51.52	53.31
CDY24776	Canola	cytosol	52.53	53.24
Bra010566.1-P	Field mustard	cytosol	52.53	53.24
CDY65854	Canola	nucleus	50.84	52.25
CDX72592	Canola	cytosol	50.84	52.25
CDY35466	Canola	cytosol	51.52	52.22
CDY42697	Canola	cytosol	50.51	51.9
VIT_18s0001g12420.t01	Wine grape	cytosol	54.88	51.75
AT4G36640.3	Thale cress	cytosol	51.18	51.7
Bra017768.1-P	Field mustard	cytosol	50.17	51.56
CDX75583	Canola	cytosol	24.58	46.5
Bra015863.1-P	Field mustard	cytosol	54.88	42.45
CDY45413	Canola	cytosol	54.88	42.34
EES02732	Sorghum	cytosol	42.42	39.87
EES17948	Sorghum	cytosol	32.32	35.56
EES05517	Sorghum	cytosol	38.38	32.57
KXG23351	Sorghum	cytosol	31.31	32.52
OQU79005	Sorghum	cytosol	30.64	30.64
EES02002	Sorghum	cytosol	23.91	27.84
EER90511	Sorghum	cytosol	23.23	27.6
EES02004	Sorghum	cytosol	21.89	26.42
KXG19106	Sorghum	plastid	18.18	21.09
EER95261	Sorghum	cytosol	20.54	13.74

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.2	EntrezGene:8059979	UniProt:C5WM40	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	EnsemblPlants:EER93541	ProteinID:EER93541	ProteinID:EER93541.1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0008150
InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191
PANTHER:PTHR10174	PANTHER:PTHR10174:SF206	SMART:SM00516	SMART:SM01100	EnsemblPlantsGene:SORBI_3001G108500	SUPFAM:SSF46938
SUPFAM:SSF52087	unigene:Sbi.2421	UniParc:UPI0001A827D8	RefSeq:XP_002466543.1	:	:

Description

hypothetical protein

Coordinates

chr1:-:8412554..8416457

Molecular Weight (calculated)

34162.7 Da

IEP (calculated)

8.185

GRAVY (calculated)

-0.513

Length

297 amino acids

Sequence
(BLAST)

001: MFRRKHDPGF NSNDAEQREA KISELKAALG TLSARGEKYC SEACLKRYLE ARNWNVAKAR KMLEESLKWR AAYRPEDIRW PDVSVEAETG KMYRASFRDR
101: EGRTVVVMKP TKQNTSSHEG QIRFLVYTLE NAIFSLPEGQ EKMVWLIDFT GWTVAHASPI KTSRETANIL QNHFPERLAI AFLFNPPKVF EAFYKVIKIF
201: LDPKSIEKVN FVYQKDEESM KVMYKYIDPE VLPVEFGGKN NVVYNHEEYS ELMIQDDIKT ANFWAVDAKT DHTNPAINGN LVPEVAPQPS LLAAKAS

Best Arabidopsis Sequence Match ( AT1G75170.1 )
(BLAST)

001: MFRWKNSSQT EQEQKEAALR EAKMKELKTL IGQLSGRNSL YCSDACLKRY LEARNWNVGK AKKMLEETLK WRSSFKPEEI RWNEVSGEGE TGKVYKAGFH
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.