Factsheet for Bra010566.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24776	Canola	cytosol	100.0	100.0
CDY35466	Canola	cytosol	98.29	98.29
Bra011696.1-P	Field mustard	nucleus	87.37	88.28
AT4G36640.3	Thale cress	cytosol	87.03	86.73
Bra017768.1-P	Field mustard	cytosol	82.94	84.08
VIT_04s0023g01720.t01	Wine grape	cytosol, mitochondrion	69.28	70.0
Solyc02g085300.2.1	Tomato	cytosol	49.83	67.59
KRH69927	Soybean	cytosol	67.24	66.55
KRH08288	Soybean	cytosol	67.24	66.55
PGSC0003DMT400038571	Potato	cytosol	60.75	66.42
GSMUA_AchrUn_...	Banana	cytosol	60.41	62.11
GSMUA_Achr4P03190_001	Banana	cytosol	55.63	58.21
GSMUA_Achr8P26360_001	Banana	cytosol	56.31	55.56
KXG37682	Sorghum	cytosol	52.9	52.9
Zm00001d033836_P001	Maize	nucleus	53.24	52.88
EER93541	Sorghum	cytosol	53.24	52.53
Os03t0724100-01	Rice	cytosol	52.22	51.17
HORVU4Hr1G074380.1	Barley	cytosol	24.23	51.08
HORVU4Hr1G009210.2	Barley	cytosol	50.85	51.03
TraesCS4A01G259700.1	Wheat	cytosol	50.51	50.68
TraesCS4D01G055200.1	Wheat	cytosol	50.51	50.68
KXG37681	Sorghum	cytosol	53.24	50.49
TraesCS4A01G259600.1	Wheat	cytosol	50.17	50.34
TraesCS4B01G055000.1	Wheat	cytosol	49.83	50.0
TraesCS4D01G055300.1	Wheat	cytosol	49.83	50.0
TraesCS4A01G259500.1	Wheat	cytosol	49.49	49.66
TraesCS4B01G055200.1	Wheat	cytosol	49.15	49.32
HORVU4Hr1G005090.2	Barley	cytosol	21.84	49.23
HORVU4Hr1G009310.1	Barley	cytosol	48.81	48.97
TraesCS4B01G055100.1	Wheat	cytosol	47.1	48.76
TraesCS4D01G055400.1	Wheat	cytosol	48.46	48.63
HORVU4Hr1G009190.1	Barley	cytosol	48.12	48.29
HORVU6Hr1G021650.1	Barley	cytosol, mitochondrion, nucleus	22.87	48.2
TraesCS7B01G089700.1	Wheat	cytosol	46.42	48.06
TraesCS4D01G055100.1	Wheat	cytosol	34.13	47.85
HORVU5Hr1G114590.3	Barley	mitochondrion	19.45	46.72
Bra015863.1-P	Field mustard	cytosol	60.75	46.35
HORVU3Hr1G080050.1	Barley	cytosol, mitochondrion, plastid	23.55	44.23
Bra012311.1-P	Field mustard	cytosol	45.05	43.28
HORVU5Hr1G020290.3	Barley	plastid	22.18	42.48
Zm00001d033837_P001	Maize	plastid	42.66	41.95
Bra000655.1-P	Field mustard	cytosol	43.0	40.78
Bra031370.1-P	Field mustard	cytosol	44.03	40.06
Bra032645.1-P	Field mustard	cytosol	20.82	26.41
Bra033247.1-P	Field mustard	cytosol	22.18	25.49
Bra026185.1-P	Field mustard	cytosol	19.45	23.27
Bra026802.1-P	Field mustard	cytosol	16.04	22.71
Bra035864.1-P	Field mustard	plastid	19.45	22.44
Bra026803.1-P	Field mustard	cytosol	19.45	22.44
Bra032465.1-P	Field mustard	cytosol	21.16	14.9
Bra015421.1-P	Field mustard	cytosol	20.14	14.68
Bra023828.1-P	Field mustard	nucleus	20.14	14.57
Bra039949.1-P	Field mustard	cytosol	19.11	13.97

Protein Annotations

EnsemblPlants:Bra010566.1	EnsemblPlants:Bra010566.1-P	EnsemblPlantsGene:Bra010566	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF206
PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI000254600E	UniProt:M4D266	MapMan:35.2	:	:

Description

AT4G36640 (E=6e-151) | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

Coordinates

chrA08:-:15219738..15220982

Molecular Weight (calculated)

33608.0 Da

IEP (calculated)

8.426

GRAVY (calculated)

-0.595

Length

293 amino acids

Sequence
(BLAST)

001: MFKRRNAHQL DDGSQHDNKV RELRSAIGPL SGQSLVFCSD ASLRRYLAAR NWNVEKAKKM LEETLKWRST YKPQEIRWNQ VAHEGETGKV SRASFHDRQG
101: RVVLIMRPAL QNSTSAEGNI KHLVYLLENA ILNLPKGQEQ MSWLIDFTGW SMAANVPMKT TREIVYILQN HYPERLGIAF LYNPPRLFQA VYRAVKYFLD
201: PCTAQKVKFV YPKDKTSDEL MTSHFDVENL PKEFGGEATL EYDHEEFSKQ MCEDDVKTAK FWGLEEKQYP KPNGFSPADV VPEPATSLAS AAS

Best Arabidopsis Sequence Match ( AT4G36640.3 )
(BLAST)

001: MFRRRNAHQL DNDDSQQDNK VRELKSAIGP LSGHSLVFCS DASLRRFLDA RNWDVEKAKK MIQETLKWRS TYKPQEIRWN QVAHEGETGK ASRASFHDRQ
101: GRVVLIMRPA MQNSTSQEGN IRHLVYLLEN AIINLPKGQK QMSWLIDFTG WSMAVNPPMK TTREIIHILQ NYYPERLGIA FLYNPPRLFQ AVYRAAKYFL
201: DPRTAEKVKF VYPKDKASDE LMTTHFDVEN LPKEFGGEAT LEYDHEDFSR QMYEDDLKTA KYWGLEGKHY PKTNGFSPSD VVPEPAIEIA SAAS

Arabidopsis Description

At4g36640 [Source:UniProtKB/TrEMBL;Acc:O23217]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.