Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G009210.2 | Barley | cytosol | 96.23 | 96.23 |
| TraesCS4D01G055100.1 | Wheat | cytosol | 65.07 | 90.91 |
| TraesCS4D01G055300.1 | Wheat | cytosol | 85.62 | 85.62 |
| TraesCS4D01G055400.1 | Wheat | cytosol | 81.85 | 81.85 |
| EER93541 | Sorghum | cytosol | 78.42 | 77.1 |
| Os03t0724100-01 | Rice | cytosol | 78.08 | 76.25 |
| KXG37682 | Sorghum | cytosol | 72.6 | 72.35 |
| Zm00001d033836_P001 | Maize | nucleus | 72.95 | 72.2 |
| KXG37681 | Sorghum | cytosol | 72.6 | 68.61 |
| Zm00001d033837_P001 | Maize | plastid | 64.04 | 62.75 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 58.22 | 60.71 |
| GSMUA_AchrUn_... | Banana | cytosol | 58.22 | 59.65 |
| VIT_04s0023g01720.t01 | Wine grape | cytosol, mitochondrion | 56.85 | 57.24 |
| PGSC0003DMT400038571 | Potato | cytosol | 51.03 | 55.6 |
| KRH15219 | Soybean | cytosol | 54.11 | 55.24 |
| Solyc02g085300.2.1 | Tomato | cytosol | 39.73 | 53.7 |
| Solyc12g089130.1.1 | Tomato | cytosol | 42.81 | 53.65 |
| KRH05807 | Soybean | cytosol | 53.42 | 53.24 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 54.11 | 53.2 |
| KRH51858 | Soybean | nucleus, plastid | 36.64 | 52.71 |
| AT1G75170.1 | Thale cress | cytosol | 53.42 | 52.7 |
| CDX73146 | Canola | cytosol | 52.05 | 52.6 |
| KRH61179 | Soybean | cytosol | 32.53 | 52.49 |
| KRH08288 | Soybean | cytosol | 53.08 | 52.36 |
| KRH69927 | Soybean | cytosol | 52.74 | 52.03 |
| PGSC0003DMT400013200 | Potato | cytosol | 50.34 | 51.22 |
| Bra011696.1-P | Field mustard | nucleus | 50.34 | 50.69 |
| CDY24776 | Canola | cytosol | 50.68 | 50.51 |
| Bra010566.1-P | Field mustard | cytosol | 50.68 | 50.51 |
| Solyc04g080290.2.1 | Tomato | cytosol | 49.32 | 50.17 |
| VIT_18s0001g12420.t01 | Wine grape | cytosol | 53.77 | 49.84 |
| CDY35466 | Canola | cytosol | 49.66 | 49.49 |
| CDY65854 | Canola | nucleus | 48.97 | 49.48 |
| CDY42697 | Canola | cytosol | 48.63 | 49.13 |
| Bra017768.1-P | Field mustard | cytosol | 48.29 | 48.79 |
| CDX72592 | Canola | cytosol | 48.29 | 48.79 |
| AT4G36640.3 | Thale cress | cytosol | 48.97 | 48.64 |
| CDX75583 | Canola | cytosol | 23.63 | 43.95 |
| Bra015863.1-P | Field mustard | cytosol | 52.4 | 39.84 |
| CDY45413 | Canola | cytosol | 52.4 | 39.74 |
| TraesCS3D01G186000.2 | Wheat | nucleus | 39.38 | 37.95 |
| TraesCS3D01G453300.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 32.19 | 33.69 |
| TraesCS7D01G090800.1 | Wheat | cytosol | 30.14 | 31.1 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 41.1 | 30.53 |
| TraesCS5D01G538500.1 | Wheat | cytosol | 22.95 | 27.35 |
| TraesCS5D01G538600.1 | Wheat | cytosol | 22.6 | 27.27 |
| TraesCS5D01G538300.1 | Wheat | cytosol | 23.63 | 27.06 |
| TraesCS3D01G433800.1 | Wheat | cytosol | 21.58 | 26.25 |
| TraesCS3D01G433700.1 | Wheat | cytosol | 21.92 | 25.7 |
| TraesCS5D01G538700.1 | Wheat | cytosol | 22.26 | 20.57 |
| TraesCS7D01G448500.3 | Wheat | mitochondrion, plastid | 17.47 | 16.45 |
| TraesCS4D01G242900.1 | Wheat | cytosol | 24.32 | 15.81 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G055200.1 | EnsemblPlantsGene:TraesCS4D01G055200 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF206 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | PRINTS:PR00180 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | TIGR:cd00170 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr4D:+:30420297..30422464
Molecular Weight (calculated)
33338.8 Da
IEP (calculated)
9.367
GRAVY (calculated)
-0.482
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRRKHASHF NSDDAEQRQA KINELRAALG PMSARGEKYC SEACLARYLE ARNWNVDKSR KMLEESLKWR ALSRPEDIRW PDVSVEAETG KMYRATFTDR
101: EGRTVVIMRP AKQNTSSHEG QLRYLIYTLE NAVLSLPQGL DKMVWLIDFT GWTLANATPI KTARDSANIL QNHYPERLSV AFLFNPPKVF EAFFKVIKVF
201: LDPKSIQKVN FVYKDNEESM KTMYKHIDPE VLPVEFGGKN IVVYNHEDYS KLMTKDDIKT ASFWAADGSH AVNGGSVPQV IPQSSPIVAK AS
101: EGRTVVIMRP AKQNTSSHEG QLRYLIYTLE NAVLSLPQGL DKMVWLIDFT GWTLANATPI KTARDSANIL QNHYPERLSV AFLFNPPKVF EAFFKVIKVF
201: LDPKSIQKVN FVYKDNEESM KTMYKHIDPE VLPVEFGGKN IVVYNHEDYS KLMTKDDIKT ASFWAADGSH AVNGGSVPQV IPQSSPIVAK AS
001: MFRWKNSSQT EQEQKEAALR EAKMKELKTL IGQLSGRNSL YCSDACLKRY LEARNWNVGK AKKMLEETLK WRSSFKPEEI RWNEVSGEGE TGKVYKAGFH
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.