Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G551900.1 | Wheat | cytosol | 95.69 | 95.69 |
| TraesCS4A01G333800.1 | Wheat | cytosol | 94.12 | 94.12 |
| TraesCS5D01G538600.1 | Wheat | cytosol | 69.41 | 73.14 |
| TraesCS5D01G538500.1 | Wheat | cytosol | 69.41 | 72.24 |
| HORVU5Hr1G121860.2 | Barley | plastid | 91.76 | 69.23 |
| Os03t0850700-01 | Rice | cytosol | 70.59 | 68.97 |
| EER90511 | Sorghum | cytosol | 66.67 | 68.0 |
| Zm00001d012847_P001 | Maize | cytosol | 67.06 | 61.96 |
| TraesCS3D01G433800.1 | Wheat | cytosol | 53.73 | 57.08 |
| TraesCS3D01G433700.1 | Wheat | cytosol | 55.29 | 56.63 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 56.86 | 55.13 |
| TraesCS5D01G538700.1 | Wheat | cytosol | 67.45 | 54.43 |
| VIT_01s0150g00170.t01 | Wine grape | cytosol | 52.16 | 54.06 |
| Bra032645.1-P | Field mustard | cytosol | 47.06 | 51.95 |
| KRH41051 | Soybean | cytosol | 49.41 | 50.81 |
| CDX90047 | Canola | cytosol | 50.2 | 50.2 |
| Bra033247.1-P | Field mustard | cytosol | 50.2 | 50.2 |
| AT1G01630.1 | Thale cress | cytosol | 50.2 | 50.2 |
| CDY15164 | Canola | cytosol | 49.41 | 49.41 |
| VIT_17s0000g00130.t01 | Wine grape | cytosol | 49.41 | 49.22 |
| CDY38020 | Canola | cytosol | 48.63 | 47.33 |
| KRH54081 | Soybean | cytosol | 48.63 | 46.79 |
| Solyc03g118150.2.1 | Tomato | cytosol | 48.63 | 45.76 |
| KRH63881 | Soybean | cytosol | 47.06 | 45.45 |
| PGSC0003DMT400036745 | Potato | cytosol | 48.24 | 45.39 |
| Solyc06g068800.2.1 | Tomato | cytosol | 48.24 | 39.81 |
| KRH59732 | Soybean | endoplasmic reticulum, golgi | 44.31 | 39.51 |
| PGSC0003DMT400065724 | Potato | cytosol | 47.84 | 39.48 |
| TraesCS4D01G055100.1 | Wheat | cytosol | 20.39 | 24.88 |
| TraesCS4D01G055200.1 | Wheat | cytosol | 27.06 | 23.63 |
| TraesCS4D01G055400.1 | Wheat | cytosol | 26.27 | 22.95 |
| TraesCS4D01G055300.1 | Wheat | cytosol | 26.27 | 22.95 |
| TraesCS3D01G186000.2 | Wheat | nucleus | 26.27 | 22.11 |
| TraesCS7D01G090800.1 | Wheat | cytosol | 23.14 | 20.85 |
| TraesCS3D01G453300.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 22.75 | 20.79 |
| TraesCS7D01G448500.3 | Wheat | mitochondrion, plastid | 20.0 | 16.45 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 24.71 | 16.03 |
| TraesCS4D01G242900.1 | Wheat | cytosol | 23.53 | 13.36 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G538300.1 | EnsemblPlantsGene:TraesCS5D01G538300 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF158 | PFAM:PF00650 |
| PFscan:PS50191 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | TIGR:cd00170 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:550509748..550512140
Molecular Weight (calculated)
29070.7 Da
IEP (calculated)
8.405
GRAVY (calculated)
-0.496
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MESGGEEQAR QNGHGGDGGD PAEWKKVAEL RAVVEAQDPA AKEEDDFMLR RFLRARDHNI SKASAMFLKY LAWKRAAQPR GSITEADVRG ELVQDKLYVQ
101: GFDKTGRPMI YLFGNRHFAA KRDLEEFKRY VVYILDNTCT KLPAGQEKFA SVVDLKGWGY ANCDIRAKLA ALEIMQNYYP ERLGRVFLIH VPYVFMAAWK
201: MVYPFIDDNT KKKFVFVADK DLDSTLRDAI DVSQLPEQYG GKLRLEGYKS SSTCN
101: GFDKTGRPMI YLFGNRHFAA KRDLEEFKRY VVYILDNTCT KLPAGQEKFA SVVDLKGWGY ANCDIRAKLA ALEIMQNYYP ERLGRVFLIH VPYVFMAAWK
201: MVYPFIDDNT KKKFVFVADK DLDSTLRDAI DVSQLPEQYG GKLRLEGYKS SSTCN
001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
Arabidopsis Description
Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.