Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033247.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY15164 | Canola | cytosol | 98.04 | 98.04 |
| CDY38020 | Canola | cytosol | 90.2 | 87.79 |
| AT1G01630.1 | Thale cress | cytosol | 87.06 | 87.06 |
| VIT_01s0150g00170.t01 | Wine grape | cytosol | 65.1 | 67.48 |
| GSMUA_Achr8P00480_001 | Banana | cytosol | 56.86 | 64.73 |
| GSMUA_Achr11P... | Banana | cytosol | 58.04 | 60.16 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 59.61 | 57.79 |
| Zm00001d042274_P001 | Maize | cytosol | 51.37 | 52.19 |
| EES02004 | Sorghum | cytosol | 50.2 | 52.03 |
| TraesCS4A01G333500.1 | Wheat | cytosol | 47.84 | 51.91 |
| EER90511 | Sorghum | cytosol | 50.59 | 51.6 |
| TraesCS5D01G538500.1 | Wheat | cytosol | 48.63 | 50.61 |
| TraesCS5B01G552100.1 | Wheat | cytosol | 47.84 | 50.41 |
| TraesCS5D01G538300.1 | Wheat | cytosol | 50.2 | 50.2 |
| TraesCS5B01G551900.1 | Wheat | cytosol | 49.8 | 49.8 |
| TraesCS5B01G552300.1 | Wheat | cytosol | 47.06 | 49.59 |
| HORVU5Hr1G121940.5 | Barley | cytosol | 48.24 | 49.4 |
| TraesCS3A01G440900.1 | Wheat | cytosol | 47.06 | 48.78 |
| TraesCS5D01G538600.1 | Wheat | cytosol | 46.27 | 48.76 |
| TraesCS4A01G333800.1 | Wheat | cytosol | 48.63 | 48.63 |
| EES02002 | Sorghum | cytosol | 48.63 | 48.63 |
| HORVU5Hr1G122080.1 | Barley | cytosol | 47.06 | 48.58 |
| TraesCS5B01G552400.1 | Wheat | cytosol | 46.67 | 48.57 |
| TraesCS3B01G475000.1 | Wheat | cytosol | 46.67 | 48.37 |
| TraesCS3D01G433800.1 | Wheat | cytosol | 45.1 | 47.92 |
| Os01t0926800-01 | Rice | cytosol, mitochondrion | 46.27 | 47.77 |
| Os03t0850700-01 | Rice | cytosol | 48.63 | 47.51 |
| TraesCS3D01G433700.1 | Wheat | cytosol | 46.27 | 47.39 |
| TraesCS3B01G475100.1 | Wheat | cytosol | 44.31 | 47.28 |
| TraesCS3A01G441000.1 | Wheat | cytosol | 45.1 | 47.13 |
| TraesCS3A01G441100.2 | Wheat | cytosol | 44.31 | 47.08 |
| Zm00001d042275_P001 | Maize | cytosol | 45.88 | 46.61 |
| TraesCS5B01G451100.1 | Wheat | cytosol | 45.49 | 46.4 |
| Zm00001d012847_P001 | Maize | cytosol | 49.8 | 46.01 |
| TraesCS5B01G552200.1 | Wheat | cytosol | 45.88 | 45.88 |
| TraesCS5D01G538700.1 | Wheat | cytosol | 47.45 | 38.29 |
| HORVU5Hr1G121860.2 | Barley | plastid | 49.8 | 37.57 |
| CDX81674 | Canola | cytosol | 35.69 | 37.3 |
| CDY33738 | Canola | cytosol | 35.29 | 36.89 |
| HORVU3Hr1G096280.6 | Barley | plastid | 44.31 | 36.69 |
| CDY33739 | Canola | cytosol | 35.69 | 35.97 |
| CDY45292 | Canola | cytosol | 33.73 | 35.1 |
| CDY51766 | Canola | cytosol | 33.73 | 35.1 |
| HORVU3Hr1G096290.4 | Barley | plastid | 46.27 | 33.52 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 35.69 | 29.93 |
| Zm00001d009968_P001 | Maize | cytosol | 32.16 | 26.28 |
| Zm00001d034765_P001 | Maize | cytosol | 29.02 | 25.96 |
| CDY38239 | Canola | cytosol | 5.88 | 23.81 |
| CDX81672 | Canola | cytosol | 34.12 | 22.66 |
| CDY00428 | Canola | cytosol | 27.06 | 22.62 |
| CDY56380 | Canola | cytosol | 26.67 | 22.3 |
| CDY24776 | Canola | cytosol | 25.49 | 22.18 |
| CDY35466 | Canola | cytosol | 25.49 | 22.18 |
| CDX73146 | Canola | cytosol | 25.1 | 22.15 |
| CDY65854 | Canola | nucleus | 25.1 | 22.15 |
| CDX72592 | Canola | cytosol | 23.92 | 21.11 |
| CDY21345 | Canola | cytosol | 26.27 | 20.81 |
| CDY42697 | Canola | cytosol | 23.53 | 20.76 |
| CDY05023 | Canola | cytosol | 25.49 | 20.7 |
| CDX87279 | Canola | plastid | 20.39 | 20.47 |
| CDY16746 | Canola | plastid | 20.39 | 20.47 |
| CDX90694 | Canola | cytosol | 24.71 | 20.39 |
| CDX75583 | Canola | cytosol | 11.76 | 19.11 |
| CDY12289 | Canola | cytosol | 14.51 | 17.54 |
| CDY45413 | Canola | cytosol | 25.1 | 16.62 |
| CDY38240 | Canola | peroxisome | 9.41 | 16.55 |
| CDY10638 | Canola | nucleus | 22.35 | 15.16 |
| CDY10026 | Canola | cytosol | 24.31 | 14.9 |
| CDY59787 | Canola | cytosol | 23.92 | 14.66 |
| CDY64658 | Canola | cytosol | 16.47 | 12.32 |
| CDY38325 | Canola | cytosol | 16.47 | 11.32 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 12.55 | 10.06 |
| CDY10103 | Canola | extracellular | 9.02 | 8.55 |
Protein Annotations
| EnsemblPlants:CDX90047 | EnsemblPlantsGene:GSBRNA2T00150550001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF198 | PFAM:PF00650 |
| PFscan:PS50191 | ProteinID:CDX90047 | ProteinID:CDX90047.1 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | UniParc:UPI000254532A | MapMan:35.1 | : | : | : |
Description
BnaA10g00350D
Coordinates
chrLK031861:+:1418228..1419842
Molecular Weight (calculated)
29270.5 Da
IEP (calculated)
7.498
GRAVY (calculated)
-0.456
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKKETKQHV VAEAEQENGT LIEDEIERSK VGIMRALCDR QDPSTKEVDD LMIRRFLRAR DMDIEKASTL FLKYLAWKKT VLPKGHIPES EIANDLSHNK
101: VCMQGHDKMG RPIVVAFGNR HNPSKGNPEE FKRFVVYTLE KICARMPRGE EKFTAIGDLQ GWGYSNCDIR GYLAALSILQ DCYPERLGKL YIVHAPYIFM
201: TAWKVVYPFI DTNTKKKIVF VENKKLTATL LEDIDETQLP DIYGGKMPLT PIQDS
101: VCMQGHDKMG RPIVVAFGNR HNPSKGNPEE FKRFVVYTLE KICARMPRGE EKFTAIGDLQ GWGYSNCDIR GYLAALSILQ DCYPERLGKL YIVHAPYIFM
201: TAWKVVYPFI DTNTKKKIVF VENKKLTATL LEDIDETQLP DIYGGKMPLT PIQDS
001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
Arabidopsis Description
Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.