Factsheet for TraesCS4A01G333500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G498700.1
TraesCS6A01G180500.1
TraesCS6A01G298800.1
TraesCS6B01G328200.1
TraesCS6D01G164600.1
TraesCS6D01G278500.1
TraesCS7A01G001900.1
TraesCS7A01G200700.1
TraesCS7B01G107500.1
TraesCS7D01G001600.2
TraesCS7D01G204000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01630.1	TraesCS6A01G298800.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS6B01G328200.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS6D01G278500.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7A01G200700.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7B01G107500.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS7D01G204000.1	AT1G68060.1	21798944
AT1G01630.1	TraesCS4A01G498700.1	AT3G54850.1	21798944
AT1G01630.1	TraesCS7A01G001900.1	AT3G54850.1	21798944
AT1G01630.1	TraesCS7D01G001600.2	AT3G54850.1	21798944
AT1G01630.1	TraesCS6A01G180500.1	AT4G32190.1	21798944
AT1G01630.1	TraesCS6D01G164600.1	AT4G32190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G552300.1	Wheat	cytosol	98.3	95.45
TraesCS5D01G538600.1	Wheat	cytosol	96.6	93.8
HORVU5Hr1G121940.5	Barley	cytosol	94.89	89.56
TraesCS4A01G333800.1	Wheat	cytosol	74.89	69.02
EER90511	Sorghum	cytosol	71.91	67.6
Os03t0850700-01	Rice	cytosol	71.06	63.98
Zm00001d012847_P001	Maize	cytosol	70.21	59.78
TraesCS3A01G441100.2	Wheat	cytosol	53.62	52.5
TraesCS3A01G440900.1	Wheat	cytosol	54.47	52.03
TraesCS3A01G441000.1	Wheat	cytosol	53.19	51.23
GSMUA_Achr4P15920_001	Banana	cytosol	56.6	50.57
VIT_01s0150g00170.t01	Wine grape	cytosol	52.34	50.0
Bra032645.1-P	Field mustard	cytosol	48.94	49.78
VIT_17s0000g00130.t01	Wine grape	cytosol	53.19	48.83
Bra033247.1-P	Field mustard	cytosol	51.91	47.84
CDX90047	Canola	cytosol	51.91	47.84
KRH41051	Soybean	cytosol	50.21	47.58
AT1G01630.1	Thale cress	cytosol	51.49	47.45
CDY15164	Canola	cytosol	51.06	47.06
Solyc03g118150.2.1	Tomato	cytosol	52.34	45.39
PGSC0003DMT400036745	Potato	cytosol	51.91	45.02
CDY38020	Canola	cytosol	49.79	44.66
KRH54081	Soybean	cytosol	49.36	43.77
KRH63881	Soybean	cytosol	48.51	43.18
Solyc06g068800.2.1	Tomato	cytosol	50.21	38.19
PGSC0003DMT400065724	Potato	cytosol	50.21	38.19
KRH59732	Soybean	endoplasmic reticulum, golgi	46.38	38.11
TraesCS3A01G181100.2	Wheat	nucleus	29.79	23.1
TraesCS4A01G259500.1	Wheat	cytosol	28.51	22.95
TraesCS4A01G259700.1	Wheat	cytosol	28.51	22.95
TraesCS4A01G259600.1	Wheat	cytosol	28.09	22.6
TraesCS7A01G460600.1	Wheat	mitochondrion, plastid	23.4	20.99
TraesCS7A01G094800.2	Wheat	cytosol	24.68	20.57
TraesCS4A01G395100.1	Wheat	cytosol	23.83	19.93
TraesCS6A01G302200.1	Wheat	nucleus	27.66	16.13
TraesCS4A01G065900.1	Wheat	cytosol	24.68	12.64

Protein Annotations

EnsemblPlants:TraesCS4A01G333500.1	EnsemblPlantsGene:TraesCS4A01G333500	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF158	PFAM:PF00650
PFscan:PS50191	SEG:seg	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
TIGR:cd00170	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:617001184..617002438

Molecular Weight (calculated)

27226.6 Da

IEP (calculated)

8.573

GRAVY (calculated)

-0.524

Length

235 amino acids

Sequence
(BLAST)

001: MDYGHGGDGD AAEWKKVAEL REVVEAQDPS AKEEDDFALR RFLRARDQNI NKASAMLLRY LAWKRVTKPH GFISEDEVRG EIAKGRDRHQ GFDRLGRPMS
101: YLYGGRHFPV RRDHEDLKRY VVYVFDKICT RLPAGQEKFA AVIDLKGWGY ANCDIRGYLA GLDIMQSYYP ERLGRVFLIH VPYIFMAAWK IVYPLIDDKT
201: KKKFVFVADR DLDATLRDAI DESQLPEEYG GKLKL

Best Arabidopsis Sequence Match ( AT1G01630.1 )
(BLAST)

001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET

Arabidopsis Description

Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.