Factsheet for TraesCS4A01G395100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G090800.1	Wheat	cytosol	92.17	91.52
TraesCS7A01G094800.2	Wheat	cytosol	91.81	91.49
HORVU7Hr1G021120.1	Barley	cytosol	86.12	85.82
TraesCS3B01G502500.1	Wheat	cytosol, nucleus, plastid	85.05	85.66
TraesCS3B01G500500.1	Wheat	cytosol, nucleus, plastid	82.92	83.51
Os05t0267800-01	Rice	cytosol	61.21	60.78
EES17948	Sorghum	cytosol	55.52	57.78
KXG23351	Sorghum	cytosol	58.72	57.69
Zm00001d037794_P001	Maize	cytosol, mitochondrion, nucleus, plastid	57.3	54.95
OQU79005	Sorghum	cytosol	57.3	54.21
Zm00001d010499_P001	Maize	plastid	52.67	51.57
TraesCS3A01G181100.2	Wheat	nucleus	45.2	41.91
GSMUA_Achr8P01630_001	Banana	cytosol	44.48	35.92
Zm00001d019055_P001	Maize	cytosol	18.86	33.33
GSMUA_Achr10P...	Banana	nucleus	44.84	33.07
TraesCS4A01G259500.1	Wheat	cytosol	32.74	31.51
TraesCS4A01G259700.1	Wheat	cytosol	32.03	30.82
TraesCS4A01G259600.1	Wheat	cytosol	31.32	30.14
GSMUA_Achr9P17070_001	Banana	cytosol	44.13	29.95
TraesCS6A01G302200.1	Wheat	nucleus	41.99	29.28
TraesCS3A01G440900.1	Wheat	cytosol	21.35	24.39
TraesCS3A01G441100.2	Wheat	cytosol	20.64	24.17
TraesCS4A01G333500.1	Wheat	cytosol	19.93	23.83
TraesCS3A01G441000.1	Wheat	cytosol	20.64	23.77
TraesCS4A01G333800.1	Wheat	cytosol	19.57	21.57
TraesCS7A01G460600.1	Wheat	mitochondrion, plastid	18.51	19.85
TraesCS4A01G065900.1	Wheat	cytosol	22.42	13.73

Protein Annotations

EnsemblPlants:TraesCS4A01G395100.1	EnsemblPlantsGene:TraesCS4A01G395100	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	ncoils:Coil	PANTHER:PTHR10174	PANTHER:PTHR10174:SF143
PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	SEG:seg	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	TIGR:cd00170	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr4A:+:669904107..669905857

Molecular Weight (calculated)

32320.1 Da

IEP (calculated)

9.136

GRAVY (calculated)

-0.684

Length

281 amino acids

Sequence
(BLAST)

001: MSYQLKKTTR SEEAAQQRAS SSEEQQQEKI NEVRGLLGNL TEEMASFLSD ATIRRFLRAR NWSAEQATKG LKETVKWRRE YRPNAISWDD IPEVENEARR
101: THVADYLDKN GRSVLVSNVP MKSKVSAKEQ IKHLVYLLEH FATNSADEQD DFVVWLTDFR GWSISSSPLS ITRESIHIIQ NYYPGVIGVA IPFDPPRIFE
201: SFWKIAKNFV QPDMKEKVKF VYANKPESIK IMADIFDLDT LESSFGGRST GTAFDINKYA ERMRRADKMR GASKDSNGHN H

Best Arabidopsis Sequence Match ( AT1G22180.2 )
(BLAST)

001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT

Arabidopsis Description

F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.