Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G243300.1 | Wheat | cytosol | 95.64 | 97.12 |
| TraesCS4D01G242900.1 | Wheat | cytosol | 94.99 | 97.1 |
| Os03t0219100-01 | Rice | cytosol | 75.16 | 78.77 |
| EER95261 | Sorghum | cytosol | 73.42 | 75.9 |
| Zm00001d048066_P001 | Maize | cytosol | 71.02 | 74.6 |
| Zm00001d028231_P003 | Maize | cytosol | 72.11 | 73.23 |
| HORVU4Hr1G067410.4 | Barley | plastid | 76.91 | 70.74 |
| GSMUA_Achr3P29630_001 | Banana | cytosol | 61.44 | 65.89 |
| GSMUA_Achr7P27040_001 | Banana | cytosol | 61.44 | 64.83 |
| GSMUA_Achr6P25200_001 | Banana | cytosol | 58.82 | 63.38 |
| VIT_05s0020g03350.t01 | Wine grape | cytosol | 53.16 | 57.68 |
| GSMUA_Achr5P08620_001 | Banana | nucleus | 58.17 | 57.54 |
| KRH35529 | Soybean | cytosol | 49.67 | 56.44 |
| PGSC0003DMT400077340 | Potato | cytosol | 51.85 | 56.26 |
| Solyc09g075970.2.1 | Tomato | cytosol | 51.42 | 55.79 |
| KRG91288 | Soybean | cytosol | 49.02 | 55.69 |
| Bra032465.1-P | Field mustard | cytosol | 47.06 | 51.92 |
| CDY59787 | Canola | cytosol | 46.84 | 51.68 |
| CDY10026 | Canola | cytosol | 46.41 | 51.2 |
| AT1G05370.1 | Thale cress | cytosol | 46.41 | 51.08 |
| CDY64658 | Canola | cytosol | 37.91 | 51.03 |
| Bra015421.1-P | Field mustard | cytosol | 44.44 | 50.75 |
| Bra039949.1-P | Field mustard | cytosol | 44.01 | 50.37 |
| AT3G22410.1 | Thale cress | cytosol | 43.14 | 49.5 |
| CDY10103 | Canola | extracellular | 28.1 | 47.96 |
| Bra023828.1-P | Field mustard | nucleus | 42.27 | 47.9 |
| CDY38325 | Canola | cytosol | 36.38 | 45.01 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 31.15 | 44.97 |
| CDY10638 | Canola | nucleus | 30.94 | 37.77 |
| TraesCS3A01G441100.2 | Wheat | cytosol | 13.29 | 25.42 |
| TraesCS3A01G440900.1 | Wheat | cytosol | 13.51 | 25.2 |
| TraesCS3A01G441000.1 | Wheat | cytosol | 13.29 | 25.0 |
| TraesCS4A01G333500.1 | Wheat | cytosol | 12.64 | 24.68 |
| TraesCS4A01G259700.1 | Wheat | cytosol | 15.47 | 24.32 |
| TraesCS4A01G259600.1 | Wheat | cytosol | 15.03 | 23.63 |
| TraesCS4A01G333800.1 | Wheat | cytosol | 12.64 | 22.75 |
| TraesCS4A01G259500.1 | Wheat | cytosol | 14.38 | 22.6 |
| TraesCS4A01G395100.1 | Wheat | cytosol | 13.73 | 22.42 |
| TraesCS7A01G094800.2 | Wheat | cytosol | 13.51 | 21.99 |
| TraesCS3A01G181100.2 | Wheat | nucleus | 13.73 | 20.79 |
| TraesCS7A01G460600.1 | Wheat | mitochondrion, plastid | 10.46 | 18.32 |
| TraesCS6A01G302200.1 | Wheat | nucleus | 14.81 | 16.87 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G065900.1 | EnsemblPlantsGene:TraesCS4A01G065900 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom_sf |
| InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF132 | PFAM:PF00650 | PFscan:PS50191 |
| SEG:seg | SMART:SM00516 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | TIGR:cd00170 | MapMan:35.2 |
Description
No Description!
Coordinates
chr4A:-:63098159..63100808
Molecular Weight (calculated)
50951.0 Da
IEP (calculated)
10.468
GRAVY (calculated)
-0.363
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKVAAMAME KVDAKDREKI EAVRKVMRKQ APLSPKQAEY CNDACVERFL RAKGDNVKKA AKTLRAVLSW RETIGADHIM ADEFSGELSD GMAYVAGHDD
101: ENRPVLMFKI KQDDYPKYQP QKSFVRFLVF TLEVAVASMN RFVDEFVLLF DASFFRSASA FLNLLMGTLK IVADYYPGRL HRAFVIDPPS LFSVMWKGVR
201: PFVDLAPATA VVSSLDFEDS LEDASFTAYP RTASLRFEPS VAAAVLTAGG KGGAAVGSAS SRFAFSVSDN ALKPWYLSTT PAPGPRSVVP ASSSPSLVGA
301: SPLSARSFSF ASPAARSTPT PLQQQQQPRA TRAPPTPSAA KGGQKAPSPL PPTPPQQQQQ FPRTPRPSFL QSPFTFRKDG QASRVERERE SFLPFLRFYR
401: RPYDEITYRA MMRRPLGGLI AIVAEDFRPM PAQPPLRRHA GALHHQHHHH QHQHQHQRI
101: ENRPVLMFKI KQDDYPKYQP QKSFVRFLVF TLEVAVASMN RFVDEFVLLF DASFFRSASA FLNLLMGTLK IVADYYPGRL HRAFVIDPPS LFSVMWKGVR
201: PFVDLAPATA VVSSLDFEDS LEDASFTAYP RTASLRFEPS VAAAVLTAGG KGGAAVGSAS SRFAFSVSDN ALKPWYLSTT PAPGPRSVVP ASSSPSLVGA
301: SPLSARSFSF ASPAARSTPT PLQQQQQPRA TRAPPTPSAA KGGQKAPSPL PPTPPQQQQQ FPRTPRPSFL QSPFTFRKDG QASRVERERE SFLPFLRFYR
401: RPYDEITYRA MMRRPLGGLI AIVAEDFRPM PAQPPLRRHA GALHHQHHHH QHQHQHQRI
001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.