Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64658 | Canola | cytosol | 95.91 | 75.66 |
| Bra015421.1-P | Field mustard | cytosol | 95.91 | 64.18 |
| AT1G05370.1 | Thale cress | cytosol | 91.82 | 59.23 |
| CDY10026 | Canola | cytosol | 87.73 | 56.73 |
| CDY59787 | Canola | cytosol | 86.62 | 56.01 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 50.93 | 43.08 |
| VIT_05s0020g03350.t01 | Wine grape | cytosol | 67.29 | 42.79 |
| CDY38325 | Canola | cytosol | 47.96 | 34.77 |
| GSMUA_Achr7P27040_001 | Banana | cytosol | 51.3 | 31.72 |
| GSMUA_Achr3P29630_001 | Banana | cytosol | 48.33 | 30.37 |
| Zm00001d048066_P001 | Maize | cytosol | 48.33 | 29.75 |
| Os03t0219100-01 | Rice | cytosol | 47.58 | 29.22 |
| GSMUA_Achr6P25200_001 | Banana | cytosol | 46.1 | 29.11 |
| EER95261 | Sorghum | cytosol | 47.58 | 28.83 |
| TraesCS4D01G242900.1 | Wheat | cytosol | 47.21 | 28.29 |
| TraesCS4A01G065900.1 | Wheat | cytosol | 47.96 | 28.1 |
| Zm00001d028231_P003 | Maize | cytosol | 47.21 | 28.1 |
| TraesCS4B01G243300.1 | Wheat | cytosol | 47.21 | 28.1 |
| GSMUA_Achr5P08620_001 | Banana | nucleus | 48.33 | 28.02 |
| HORVU4Hr1G067410.4 | Barley | plastid | 48.33 | 26.05 |
| CDY10638 | Canola | nucleus | 21.93 | 15.69 |
| CDY38240 | Canola | peroxisome | 8.18 | 15.17 |
| CDY12289 | Canola | cytosol | 10.41 | 13.27 |
| CDY00428 | Canola | cytosol | 11.52 | 10.16 |
| CDY56380 | Canola | cytosol | 11.52 | 10.16 |
| CDY21345 | Canola | cytosol | 11.15 | 9.32 |
| CDY05023 | Canola | cytosol | 10.78 | 9.24 |
| CDX90694 | Canola | cytosol | 10.41 | 9.06 |
| CDX90047 | Canola | cytosol | 8.55 | 9.02 |
| CDY38020 | Canola | cytosol | 8.55 | 8.78 |
| CDY15164 | Canola | cytosol | 8.18 | 8.63 |
| CDY33738 | Canola | cytosol | 7.81 | 8.61 |
| CDY24776 | Canola | cytosol | 9.29 | 8.53 |
| CDX81674 | Canola | cytosol | 7.43 | 8.2 |
| CDY35466 | Canola | cytosol | 8.92 | 8.19 |
| CDX72592 | Canola | cytosol | 8.55 | 7.96 |
| CDY65854 | Canola | nucleus | 8.55 | 7.96 |
| CDY42697 | Canola | cytosol | 8.55 | 7.96 |
| CDX73146 | Canola | cytosol | 8.18 | 7.61 |
| CDY33739 | Canola | cytosol | 7.06 | 7.51 |
| CDY51766 | Canola | cytosol | 6.32 | 6.94 |
| CDY45292 | Canola | cytosol | 6.32 | 6.94 |
| CDX87279 | Canola | plastid | 6.32 | 6.69 |
| CDY16746 | Canola | plastid | 6.32 | 6.69 |
| CDY38239 | Canola | cytosol | 1.49 | 6.35 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 7.06 | 6.25 |
| CDY45413 | Canola | cytosol | 8.92 | 6.23 |
| CDX81672 | Canola | cytosol | 6.32 | 4.43 |
| CDX75583 | Canola | cytosol | 1.12 | 1.91 |
Protein Annotations
| EnsemblPlants:CDY10103 | EnsemblPlantsGene:GSBRNA2T00031906001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:IPR001251 |
| InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF132 | PFAM:PF00650 | PFscan:PS50191 | ProteinID:CDY10103 |
| ProteinID:CDY10103.1 | SEG:seg | SUPFAM:SSF52087 | UniParc:UPI0004EEAE37 | UniProt:A0A078FDI1 | MapMan:35.2 |
Description
BnaC05g03460DBnaC05g03460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDI1]
Coordinates
chrLK032001:-:30207..31245
Molecular Weight (calculated)
30483.5 Da
IEP (calculated)
10.891
GRAVY (calculated)
-0.267
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGFFKSASA FMNILVTTLK IVAEYYPCRL FKAFVIDAPS LFSYLWKGIR SFLDLSTATM IVSMQNFQNS FDYDDFSSSY PSRVSSLRFD TSSVKSTDKI
101: GSCASSRFAF TVSRDGLDTV KPWCLTLTDT SSSKLGHTGA YLSPLNARSF SFASPAARRE PIGGPRRSFF ASTPMPARTT DRHCIGGTLR DPRVPRPSFF
201: QSPAVFFRRE SHVSKTEKPR DTFLPFLKFY RRPYDEMTYR SKMRPPLGGL VSIVSTQIRR RHVSLSQRF
101: GSCASSRFAF TVSRDGLDTV KPWCLTLTDT SSSKLGHTGA YLSPLNARSF SFASPAARRE PIGGPRRSFF ASTPMPARTT DRHCIGGTLR DPRVPRPSFF
201: QSPAVFFRRE SHVSKTEKPR DTFLPFLKFY RRPYDEMTYR SKMRPPLGGL VSIVSTQIRR RHVSLSQRF
001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.