CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028231_P003	Maize	cytosol	92.57	90.93
Zm00001d048066_P001	Maize	cytosol	87.39	88.79
Os03t0219100-01	Rice	cytosol	82.21	83.33
TraesCS4D01G242900.1	Wheat	cytosol	75.23	74.39
TraesCS4B01G243300.1	Wheat	cytosol	75.68	74.34
TraesCS4A01G065900.1	Wheat	cytosol	75.9	73.42
GSMUA_Achr3P29630_001	Banana	cytosol	62.39	64.72
GSMUA_Achr7P27040_001	Banana	cytosol	62.84	64.14
GSMUA_Achr6P25200_001	Banana	cytosol	60.59	63.15
HORVU4Hr1G067410.4	Barley	plastid	68.24	60.72
VIT_05s0020g03350.t01	Wine grape	cytosol	57.21	60.05
KRH35529	Soybean	cytosol	53.6	58.91
PGSC0003DMT400077340	Potato	cytosol	55.86	58.63
Solyc09g075970.2.1	Tomato	cytosol	55.86	58.63
GSMUA_Achr5P08620_001	Banana	nucleus	61.26	58.62
KRG91288	Soybean	cytosol	52.25	57.43
Bra032465.1-P	Field mustard	cytosol	49.32	52.64
CDY59787	Canola	cytosol	49.1	52.4
CDY10026	Canola	cytosol	48.87	52.16
AT1G05370.1	Thale cress	cytosol	48.87	52.04
CDY64658	Canola	cytosol	39.41	51.32
Bra039949.1-P	Field mustard	cytosol	46.17	51.12
Bra015421.1-P	Field mustard	cytosol	45.72	50.5
AT3G22410.1	Thale cress	cytosol	44.82	49.75
CDY10103	Canola	extracellular	28.83	47.58
Bra023828.1-P	Field mustard	nucleus	43.24	47.41
CDY38325	Canola	cytosol	38.29	45.82
CDY71148	Canola	cytosol, mitochondrion, nucleus, plastid	32.43	45.28
CDY10638	Canola	nucleus	32.66	38.56
EER90511	Sorghum	cytosol	13.74	24.4
EES02004	Sorghum	cytosol	13.29	23.98
KXG37682	Sorghum	cytosol	15.32	23.21
EES02002	Sorghum	cytosol	13.06	22.75
EES02732	Sorghum	cytosol	15.54	21.84
EER93541	Sorghum	cytosol	13.74	20.54
KXG37681	Sorghum	cytosol	14.19	20.39
OQU79005	Sorghum	cytosol	13.06	19.53
KXG19106	Sorghum	plastid	10.81	18.75
EES05517	Sorghum	cytosol	14.19	18.0
EES17948	Sorghum	cytosol	10.59	17.41
KXG23351	Sorghum	cytosol	10.59	16.43

Protein Annotations

EnsemblPlants:EER95261	EnsemblPlantsGene:SORBI_3001G453900	EntrezGene:8056879	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF132	PFAM:PF00650
PFscan:PS50191	ProteinID:EER95261	ProteinID:EER95261.1	RefSeq:XP_002468263.1	SEG:seg	SMART:SM00516
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0001A8338E	UniProt:C5WSQ5	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr1:-:73025901..73029096

Molecular Weight (calculated)

49127.0 Da

IEP (calculated)

10.523

GRAVY (calculated)

-0.241

Length

444 amino acids

Sequence
(BLAST)

001: MAIDKVDAKE REKIEAVRKL LRKQAPLSAK QAQYCNDACV ERFLRSRGEN VKKAAKHLRT VLSWRETVGA DHIMADEFSA ELADGVAFVS GHDDDGRPVV
101: VFRIKQDYPK FHSQKSFVRL MVFTLEVAVA CMSRFVDQFV LLFDASFFRS ASAFLNLLMG TLKIVADYYP GRLHRAFVID PPSLFSVLWK GVRPFVELAP
201: ATAVVCSLDF EDSLEDASFT AYPRTASLRY EPAVAAAAAV VGKAGVGSAS SRFSVTPTDN PIKPWYLSTI PTSVGSRSVV PTSSSPSLVG ASPLSARSFS
301: FASPATLRST AATPPPFPRG GVGAPPLTPS SAAKGPHKTP PPAQHFPRTP RPSFLQSPSM LFAFRKEGQG ASRVERERES FLPYLRFYRR PYDEISYRAK
401: MRPPLGGLIS IVGEKFKQKP VQQPLRRHAG LHHHNHHYQQ QQRI

Best Arabidopsis Sequence Match ( AT3G22410.1 )
(BLAST)

001: MGKKDEKVEA VLRLVKKQSP LTFKQEKFCN RECVERFLKV KGDNVKKAAK QLSSCLSWRQ NFDIERLGAE EFSTELSDGV AYISGHDRES RPVIIFRFKH
101: DYQKLHTQKQ FTRLVAFTIE TAISSMSRNT EQSFVLLFDA SFFRSSSAFA NLLLATLKII ADNYPCRLYK AFIIDPPSFF SYLWKGVRPF VELSTATMIL
201: SSLDYDEPLD ITHVSSNPRS TSLRFDASSI KSTASIGSAS SRFAFTVSQN SLKPWYLSFT DTSPYNPAVS SSAAAPVSPL SARSLPFASP AVRGFKDAKP
301: AACRKSLFPS TPLPEKTKTV SYRKTPRPSF FQSPAMFFRR ENNVGGGGEK SREAFVPYLK FYRRPYDETA YRSKLRGPRG FLSVVSSHRR SRHVSLSQRF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9LUV9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.