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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d037794_P001 Maize cytosol, mitochondrion, nucleus, plastid 78.79 79.86
EES17948 Sorghum cytosol 57.24 62.96
KXG23351 Sorghum cytosol 58.92 61.19
Os05t0267800-01 Rice cytosol 57.24 60.07
TraesCS3B01G502500.1 Wheat cytosol, nucleus, plastid 54.55 58.06
TraesCS4A01G395100.1 Wheat cytosol 54.21 57.3
HORVU7Hr1G021120.1 Barley cytosol 54.21 57.09
TraesCS3D01G453300.2 Wheat cytosol, mitochondrion, nucleus, plastid 53.54 56.99
TraesCS3B01G500500.1 Wheat cytosol, nucleus, plastid 53.54 56.99
TraesCS7D01G090800.1 Wheat cytosol 53.87 56.54
TraesCS7A01G094800.2 Wheat cytosol 52.19 54.96
EES02732 Sorghum cytosol 41.08 38.61
GSMUA_Achr8P01630_001 Banana cytosol 42.42 36.21
GSMUA_Achr10P... Banana nucleus 42.42 33.07
GSMUA_Achr9P17070_001 Banana cytosol 44.44 31.88
KXG37681 Sorghum cytosol 32.66 31.39
EER93541 Sorghum cytosol 30.64 30.64
KXG37682 Sorghum cytosol 28.96 29.35
EES05517 Sorghum cytosol 34.01 28.86
EES02004 Sorghum cytosol 18.86 22.76
EES02002 Sorghum cytosol 19.53 22.75
EER90511 Sorghum cytosol 17.51 20.8
KXG19106 Sorghum plastid 15.82 18.36
EER95261 Sorghum cytosol 19.53 13.06
Protein Annotations
EnsemblPlants:OQU79005EnsemblPlantsGene:SORBI_3008G088000Gene3D:3.40.525.10InterPro:CRAL-TRIO_domInterPro:CRAL-TRIO_dom_sfInterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sfInterPro:IPR001251InterPro:IPR036865PANTHER:PTHR10174PANTHER:PTHR10174:SF143PFAM:PF00650
PFscan:PS50191ProteinID:OQU79005ProteinID:OQU79005.1SMART:SM00516SMART:SM01100SUPFAM:SSF46938
SUPFAM:SSF52087unigene:Sbi.3186UniParc:UPI000B42517AUniProt:A0A1Z5R6D2MapMan:35.2:
Description
hypothetical protein
Coordinates
chr8:+:18590683..18599918
Molecular Weight (calculated)
34962.6 Da
IEP (calculated)
8.864
GRAVY (calculated)
-0.710
Length
297 amino acids
Sequence
(BLAST)
001: MTYLLKSRSE PTQLLPASSE EQQRKINEVR ELLGDLPTEM PNFLSDATIR RFLRARNWST TKATKSLKET TSWRRHYKPE KIRWESIADS ENEAKRAYIP
101: DYLDKNGRMV FVTLPAIKGL KQCQLQRYTQ TKTSEKDHLK YLVYNLETLL MYSEDAEEEC IVWISDFQGW AISSTPFSLT RQSLHIIQQY YPGLIAVAIL
201: TNPPIIFESF WKIIKRFLEP RMNEKVKFIY SNNSESQKIM GDMFDLDKLE YIFGGRNTAE FDINMYAERM KRRDRVRGSW TQDNGEASSN NTKPNED
Best Arabidopsis Sequence Match ( AT1G22180.2 )
(BLAST)
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.