CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033836_P001	Maize	nucleus	87.06	91.19
EER93541	Sorghum	cytosol	72.82	75.76
KXG37682	Sorghum	cytosol	68.93	72.7
TraesCS4D01G055200.1	Wheat	cytosol	68.61	72.6
TraesCS4B01G055000.1	Wheat	cytosol	68.28	72.26
TraesCS4A01G259700.1	Wheat	cytosol	67.96	71.92
HORVU4Hr1G009210.2	Barley	cytosol	66.67	70.55
Os03t0724100-01	Rice	cytosol	67.96	70.23
HORVU4Hr1G074380.1	Barley	cytosol	31.39	69.78
HORVU4Hr1G009190.1	Barley	cytosol	64.4	68.15
TraesCS4B01G055100.1	Wheat	cytosol	62.14	67.84
TraesCS4D01G055100.1	Wheat	cytosol	45.31	66.99
TraesCS4D01G055300.1	Wheat	cytosol	62.46	66.1
HORVU4Hr1G009310.1	Barley	cytosol	62.46	66.1
TraesCS4A01G259600.1	Wheat	cytosol	62.14	65.75
TraesCS4A01G259500.1	Wheat	cytosol	62.14	65.75
TraesCS4D01G055400.1	Wheat	cytosol	62.14	65.75
TraesCS4B01G055200.1	Wheat	cytosol	61.16	64.73
HORVU5Hr1G114590.3	Barley	mitochondrion	25.24	63.93
HORVU6Hr1G021650.1	Barley	cytosol, mitochondrion, nucleus	28.16	62.59
TraesCS7B01G089700.1	Wheat	cytosol	57.28	62.54
HORVU4Hr1G005090.2	Barley	cytosol	26.21	62.31
GSMUA_Achr4P03190_001	Banana	cytosol	53.72	59.29
GSMUA_AchrUn_...	Banana	cytosol	53.4	57.89
HORVU3Hr1G080050.1	Barley	cytosol, mitochondrion, plastid	28.8	57.05
HORVU5Hr1G020290.3	Barley	plastid	27.83	56.21
PGSC0003DMT400038571	Potato	cytosol	47.57	54.85
VIT_04s0023g01720.t01	Wine grape	cytosol, mitochondrion	51.46	54.83
Solyc02g085300.2.1	Tomato	cytosol	37.86	54.17
KRH15219	Soybean	cytosol	49.51	53.5
CDY24776	Canola	cytosol	50.49	53.24
Bra010566.1-P	Field mustard	cytosol	50.49	53.24
Bra011696.1-P	Field mustard	nucleus	49.84	53.1
CDY65854	Canola	nucleus	49.19	52.6
CDX73146	Canola	cytosol	49.19	52.6
AT1G75170.1	Thale cress	cytosol	50.16	52.36
CDY35466	Canola	cytosol	49.51	52.22
KRH51858	Soybean	nucleus, plastid	34.3	52.22
Solyc12g089130.1.1	Tomato	cytosol	39.16	51.93
CDY42697	Canola	cytosol	48.54	51.9
CDX72592	Canola	cytosol	48.54	51.9
GSMUA_Achr8P26360_001	Banana	cytosol	49.84	51.85
AT4G36640.3	Thale cress	cytosol	49.19	51.7
KRH05807	Soybean	cytosol	48.87	51.54
KRH61179	Soybean	cytosol	30.1	51.38
Bra017768.1-P	Field mustard	cytosol	47.9	51.21
KRH69927	Soybean	cytosol	48.87	51.01
KRH08288	Soybean	cytosol	48.22	50.34
CDX75583	Canola	cytosol	25.57	50.32
PGSC0003DMT400013200	Potato	cytosol	46.6	50.17
VIT_18s0001g12420.t01	Wine grape	cytosol	50.81	49.84
Solyc04g080290.2.1	Tomato	cytosol	45.31	48.78
Bra015863.1-P	Field mustard	cytosol	49.84	40.1
CDY45413	Canola	cytosol	49.84	40.0
EES02732	Sorghum	cytosol	38.51	37.66
KXG23351	Sorghum	cytosol	33.01	35.66
EES17948	Sorghum	cytosol	30.74	35.19
OQU79005	Sorghum	cytosol	31.39	32.66
EER90511	Sorghum	cytosol	24.27	30.0
EES05517	Sorghum	cytosol	33.33	29.43
EES02002	Sorghum	cytosol	22.65	27.45
EES02004	Sorghum	cytosol	20.71	26.02
KXG19106	Sorghum	plastid	15.53	18.75
EER95261	Sorghum	cytosol	20.39	14.19

Protein Annotations

EnsemblPlants:KXG37681	EnsemblPlantsGene:SORBI_3001G108600	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF206	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	ProteinID:KXG37681	ProteinID:KXG37681.1	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000220702E	UniProt:A0A1B6QID8	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr1:-:8424872..8428271

Molecular Weight (calculated)

36126.0 Da

IEP (calculated)

7.119

GRAVY (calculated)

-0.580

Length

309 amino acids

Sequence
(BLAST)

001: MFLVEHHWEW KKGIMFRRKH ASHFNSNDAE QQEAKINELK YALGPLSAHD EKYCSDTCFR RYLEARNWNV TKSRKMLEES LKWRATYKPE DIRWPDVSVE
101: AETGKMYKAS FRDREGRTVI IMRPTKENST SHDGKIRFLV YVLENAILGQ HEGQEKMVWL IDFAGWTMAH ATPIKTARES TSILQNHYPE RLAVAFLFNP
201: PKVFEAFYKA VKYFLDPRSI EKLNFVYLKD EESMKVLYKC IDPEVLPVEF GGRNSVMYNH EEYSKLMLQE DIEPSSFWED DAKTVDHAVN GTLVPDVAPR
301: SLQLAAKAS

Best Arabidopsis Sequence Match ( AT1G75170.1 )
(BLAST)

001: MFRWKNSSQT EQEQKEAALR EAKMKELKTL IGQLSGRNSL YCSDACLKRY LEARNWNVGK AKKMLEETLK WRSSFKPEEI RWNEVSGEGE TGKVYKAGFH
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.