Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65854 | Canola | nucleus | 97.24 | 97.58 |
| Bra010566.1-P | Field mustard | cytosol | 88.28 | 87.37 |
| Bra017768.1-P | Field mustard | cytosol | 84.48 | 84.78 |
| AT4G36640.3 | Thale cress | cytosol | 83.79 | 82.65 |
| VIT_04s0023g01720.t01 | Wine grape | cytosol, mitochondrion | 71.03 | 71.03 |
| Solyc02g085300.2.1 | Tomato | cytosol | 50.69 | 68.06 |
| PGSC0003DMT400038571 | Potato | cytosol | 62.41 | 67.54 |
| KRH08288 | Soybean | cytosol | 68.62 | 67.23 |
| KRH69927 | Soybean | cytosol | 68.28 | 66.89 |
| GSMUA_AchrUn_... | Banana | cytosol | 58.97 | 60.0 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 53.45 | 55.36 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 56.21 | 54.88 |
| Zm00001d033836_P001 | Maize | nucleus | 53.1 | 52.2 |
| EER93541 | Sorghum | cytosol | 53.45 | 52.19 |
| KXG37682 | Sorghum | cytosol | 52.41 | 51.88 |
| HORVU4Hr1G009210.2 | Barley | cytosol | 51.03 | 50.68 |
| HORVU4Hr1G074380.1 | Barley | cytosol | 24.14 | 50.36 |
| TraesCS4D01G055200.1 | Wheat | cytosol | 50.69 | 50.34 |
| TraesCS4A01G259700.1 | Wheat | cytosol | 50.69 | 50.34 |
| KXG37681 | Sorghum | cytosol | 53.1 | 49.84 |
| Os03t0724100-01 | Rice | cytosol | 51.03 | 49.5 |
| TraesCS4A01G259600.1 | Wheat | cytosol | 49.66 | 49.32 |
| TraesCS4B01G055000.1 | Wheat | cytosol | 49.31 | 48.97 |
| TraesCS4D01G055300.1 | Wheat | cytosol | 49.31 | 48.97 |
| TraesCS4D01G055100.1 | Wheat | cytosol | 35.17 | 48.8 |
| TraesCS4D01G055400.1 | Wheat | cytosol | 48.97 | 48.63 |
| HORVU4Hr1G005090.2 | Barley | cytosol | 21.72 | 48.46 |
| TraesCS4B01G055200.1 | Wheat | cytosol | 48.62 | 48.29 |
| HORVU4Hr1G009310.1 | Barley | cytosol | 48.28 | 47.95 |
| TraesCS4A01G259500.1 | Wheat | cytosol | 48.28 | 47.95 |
| TraesCS4B01G055100.1 | Wheat | cytosol | 46.55 | 47.7 |
| HORVU4Hr1G009190.1 | Barley | cytosol | 47.59 | 47.26 |
| HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 22.41 | 46.76 |
| TraesCS7B01G089700.1 | Wheat | cytosol | 45.52 | 46.64 |
| HORVU5Hr1G114590.3 | Barley | mitochondrion | 18.97 | 45.08 |
| Bra015863.1-P | Field mustard | cytosol | 57.93 | 43.75 |
| HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 23.45 | 43.59 |
| Bra012311.1-P | Field mustard | cytosol | 44.48 | 42.3 |
| Zm00001d033837_P001 | Maize | plastid | 43.1 | 41.95 |
| HORVU5Hr1G020290.3 | Barley | plastid | 22.07 | 41.83 |
| Bra000655.1-P | Field mustard | cytosol | 43.45 | 40.78 |
| Bra031370.1-P | Field mustard | cytosol | 43.45 | 39.13 |
| Bra032645.1-P | Field mustard | cytosol | 21.38 | 26.84 |
| Bra033247.1-P | Field mustard | cytosol | 22.07 | 25.1 |
| Bra035864.1-P | Field mustard | plastid | 19.66 | 22.44 |
| Bra026802.1-P | Field mustard | cytosol | 15.86 | 22.22 |
| Bra026185.1-P | Field mustard | cytosol | 18.28 | 21.63 |
| Bra026803.1-P | Field mustard | cytosol | 17.93 | 20.47 |
| Bra032465.1-P | Field mustard | cytosol | 20.34 | 14.18 |
| Bra015421.1-P | Field mustard | cytosol | 19.66 | 14.18 |
| Bra023828.1-P | Field mustard | nucleus | 19.66 | 14.07 |
| Bra039949.1-P | Field mustard | cytosol | 18.62 | 13.47 |
Protein Annotations
| EnsemblPlants:Bra011696.1 | EnsemblPlants:Bra011696.1-P | EnsemblPlantsGene:Bra011696 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF206 |
| PFAM:PF00650 | PFAM:PF03765 | PFscan:PS50191 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | UniParc:UPI00025469B9 | UniProt:M4D5D9 | MapMan:35.2 | : | : |
Description
AT4G36640 (E=3e-143) | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Coordinates
chrA01:+:1011838..1013062
Molecular Weight (calculated)
33390.6 Da
IEP (calculated)
9.108
GRAVY (calculated)
-0.648
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKRKNAHQL DDDSQQDNKV SKLRSALGPL SGHSLVFCSD ASLRRYLDAR NWNVEKAKKM IEETLKWRST YKPHEIRWHQ VAHEGETGKV SRASFHDRQG
101: RVVLIMRPTM QNSTSAEGNI RHLVYLLENA ILNLPRGQEQ MSWLIDFTGW SMAANVPMKT TRDIVYILQN HYPERLGMAF LYNPPRLFQA GYKAIKFFLD
201: PRTAQKVKFV YPKDKTSDEL MKSHFDVENL PKEFGGKATL AYDHEEFSRQ MYEDDVKTAK YWGLEDTEPN GFHAADVVSE PATSLASAAS
101: RVVLIMRPTM QNSTSAEGNI RHLVYLLENA ILNLPRGQEQ MSWLIDFTGW SMAANVPMKT TRDIVYILQN HYPERLGMAF LYNPPRLFQA GYKAIKFFLD
201: PRTAQKVKFV YPKDKTSDEL MKSHFDVENL PKEFGGKATL AYDHEEFSRQ MYEDDVKTAK YWGLEDTEPN GFHAADVVSE PATSLASAAS
001: MFRRRNAHQL DNDDSQQDNK VRELKSAIGP LSGHSLVFCS DASLRRFLDA RNWDVEKAKK MIQETLKWRS TYKPQEIRWN QVAHEGETGK ASRASFHDRQ
101: GRVVLIMRPA MQNSTSQEGN IRHLVYLLEN AIINLPKGQK QMSWLIDFTG WSMAVNPPMK TTREIIHILQ NYYPERLGIA FLYNPPRLFQ AVYRAAKYFL
201: DPRTAEKVKF VYPKDKASDE LMTTHFDVEN LPKEFGGEAT LEYDHEDFSR QMYEDDLKTA KYWGLEGKHY PKTNGFSPSD VVPEPAIEIA SAAS
101: GRVVLIMRPA MQNSTSQEGN IRHLVYLLEN AIINLPKGQK QMSWLIDFTG WSMAVNPPMK TTREIIHILQ NYYPERLGIA FLYNPPRLFQ AVYRAAKYFL
201: DPRTAEKVKF VYPKDKASDE LMTTHFDVEN LPKEFGGEAT LEYDHEDFSR QMYEDDLKTA KYWGLEGKHY PKTNGFSPSD VVPEPAIEIA SAAS
Arabidopsis Description
At4g36640 [Source:UniProtKB/TrEMBL;Acc:O23217]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.