Factsheet for PGSC0003DMT400038571

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g085300.2.1	Tomato	cytosol	73.13	90.74
VIT_04s0023g01720.t01	Wine grape	cytosol, mitochondrion	76.12	70.34
KRH69927	Soybean	cytosol	72.76	65.88
KRH08288	Soybean	cytosol	70.52	63.85
PGSC0003DMT400013200	Potato	cytosol	68.28	63.76
Bra011696.1-P	Field mustard	nucleus	67.54	62.41
CDY65854	Canola	nucleus	67.16	62.28
CDY42697	Canola	cytosol	66.79	61.94
Bra017768.1-P	Field mustard	cytosol	66.42	61.59
CDX72592	Canola	cytosol	66.42	61.59
CDY24776	Canola	cytosol	66.42	60.75
Bra010566.1-P	Field mustard	cytosol	66.42	60.75
CDY35466	Canola	cytosol	65.67	60.07
GSMUA_AchrUn_...	Banana	cytosol	63.43	59.65
GSMUA_Achr4P03190_001	Banana	cytosol	61.94	59.29
AT4G36640.3	Thale cress	cytosol	63.06	57.48
HORVU4Hr1G074380.1	Barley	cytosol	29.1	56.12
CDX75583	Canola	cytosol	32.46	55.41
GSMUA_Achr8P26360_001	Banana	cytosol	60.45	54.55
KXG37682	Sorghum	cytosol	57.46	52.56
Os03t0724100-01	Rice	cytosol	57.84	51.84
TraesCS4D01G055100.1	Wheat	cytosol	40.3	51.67
HORVU4Hr1G005090.2	Barley	cytosol	25.0	51.54
HORVU6Hr1G021650.1	Barley	cytosol, mitochondrion, nucleus	26.49	51.08
TraesCS4A01G259700.1	Wheat	cytosol	55.6	51.03
TraesCS4D01G055200.1	Wheat	cytosol	55.6	51.03
TraesCS4B01G055000.1	Wheat	cytosol	55.22	50.68
HORVU4Hr1G009210.2	Barley	cytosol	55.22	50.68
EER93541	Sorghum	cytosol	55.97	50.51
Zm00001d033836_P001	Maize	nucleus	55.22	50.17
HORVU5Hr1G114590.3	Barley	mitochondrion	22.76	50.0
TraesCS4D01G055300.1	Wheat	cytosol	54.1	49.66
TraesCS4A01G259600.1	Wheat	cytosol	53.73	49.32
TraesCS4D01G055400.1	Wheat	cytosol	52.99	48.63
HORVU4Hr1G009310.1	Barley	cytosol	52.99	48.63
TraesCS4A01G259500.1	Wheat	cytosol	52.61	48.29
TraesCS4B01G055200.1	Wheat	cytosol	52.24	47.95
TraesCS4B01G055100.1	Wheat	cytosol	50.37	47.7
KXG37681	Sorghum	cytosol	54.85	47.57
TraesCS7B01G089700.1	Wheat	cytosol	50.0	47.35
HORVU4Hr1G009190.1	Barley	cytosol	51.49	47.26
HORVU3Hr1G080050.1	Barley	cytosol, mitochondrion, plastid	27.24	46.79
HORVU5Hr1G020290.3	Barley	plastid	26.49	46.41
Zm00001d033837_P001	Maize	plastid	44.78	40.27
PGSC0003DMT400024527	Potato	cytosol	43.66	35.45
PGSC0003DMT400018571	Potato	cytosol	42.91	35.17
PGSC0003DMT400036745	Potato	cytosol	24.25	23.99
PGSC0003DMT400058687	Potato	cytosol	20.9	23.33
PGSC0003DMT400046785	Potato	mitochondrion	19.78	20.23
PGSC0003DMT400058639	Potato	cytosol	15.3	20.2
PGSC0003DMT400058682	Potato	cytosol	20.9	19.79
PGSC0003DMT400065724	Potato	cytosol	22.01	19.09
PGSC0003DMT400058685	Potato	cytosol	12.31	16.42
PGSC0003DMT400077340	Potato	cytosol	22.76	14.42

Protein Annotations

EntrezGene:102604798	Gene3D:3.40.525.10	MapMan:35.2	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	UniProt:M1B740	PFAM:PF00650	PFAM:PF03765
EnsemblPlantsGene:PGSC0003DMG400014899	PGSC:PGSC0003DMG400014899	EnsemblPlants:PGSC0003DMT400038571	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR10174
PANTHER:PTHR10174:SF206	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000295DAD6
RefSeq:XP_006340611.1	RefSeq:XP_015159872.1	RefSeq:XP_015159873.1	RefSeq:XP_015159879.1	RefSeq:XP_015159880.1	RefSeq:XP_015159882.1

Description

Transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400014899]

Coordinates

chr2:-:40533080..40540243

Molecular Weight (calculated)

31354.5 Da

IEP (calculated)

9.681

GRAVY (calculated)

-0.605

Length

268 amino acids

Sequence
(BLAST)

001: MFRRKSSHTN QADDSASRDA KVSELRVSLG PLSGRSLKLC TDVCLRRYLD ARNWNLDKAK KMLEETLKWR SNYKPEEIRW HEVAHESETG KVFKANFRDR
101: LGRTVLIMRP GKQNTSSPEG NIRQLVYLTE NAILNLPEGQ EQMSWLIDFN GWSLNTNIPI KTARDIIYIL QNHYPERLAI VVLYSPPRLF EAFWKVVKYF
201: IDSKTFEKIK FVYPNNKDSV ELMKTFFDTE NLPSEFGGKA TLNYDHEEFS KLMAQEDVKT AKFWGLTK

Best Arabidopsis Sequence Match ( AT1G75170.1 )
(BLAST)

001: MFRWKNSSQT EQEQKEAALR EAKMKELKTL IGQLSGRNSL YCSDACLKRY LEARNWNVGK AKKMLEETLK WRSSFKPEEI RWNEVSGEGE TGKVYKAGFH
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.