Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g098600.2.1 | Tomato | cytosol | 83.18 | 89.18 |
| KRH64923 | Soybean | nucleus | 47.71 | 54.74 |
| VIT_08s0056g00730.t01 | Wine grape | cytosol | 52.6 | 54.26 |
| PGSC0003DMT400024527 | Potato | cytosol | 47.09 | 46.67 |
| PGSC0003DMT400038571 | Potato | cytosol | 35.17 | 42.91 |
| PGSC0003DMT400013200 | Potato | cytosol | 36.09 | 41.12 |
| PGSC0003DMT400036745 | Potato | cytosol | 20.49 | 24.72 |
| PGSC0003DMT400058687 | Potato | cytosol | 16.21 | 22.08 |
| PGSC0003DMT400046785 | Potato | mitochondrion | 16.51 | 20.61 |
| PGSC0003DMT400065724 | Potato | cytosol | 18.35 | 19.42 |
| PGSC0003DMT400058639 | Potato | cytosol | 11.93 | 19.21 |
| PGSC0003DMT400058682 | Potato | cytosol | 16.21 | 18.73 |
| PGSC0003DMT400058685 | Potato | cytosol | 9.79 | 15.92 |
| PGSC0003DMT400077340 | Potato | cytosol | 18.96 | 14.66 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400018571 | EnsemblPlantsGene:PGSC0003DMG400007206 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF202 | PFAM:PF00650 |
| PFscan:PS50191 | PGSC:PGSC0003DMG400007206 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| UniParc:UPI00029612A4 | UniProt:M1AAV8 | MapMan:35.2 | : | : | : |
Description
Transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400007206]
Coordinates
chr10:-:59622504..59625600
Molecular Weight (calculated)
37729.0 Da
IEP (calculated)
5.043
GRAVY (calculated)
-0.560
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSKKSQGVE FSLSSAEQQA KMNEVRKLIG PALNKFPAMC SDASIQRFLR ARNWHTKRSA KMLKEALIWR LENKPNMIRW DDIAQQAEPG KVYKANYFDK
101: YGRTVLVMKP GIPNPYSVEM QMRYLVYCME NSILDLKSGQ EQMVWLIDFE GWNMSSISVK VTRETARILQ DCYPERLGLA ILYNPPKVFE SFWILVKPFL
201: EKRTYKKVKF VYPNDVDTQK VMEDLFDMDK LESCFGGKCT QGFDYVTYSN RMREGDKVMT DFVISGAPLP SDQYLTTLDN GFELSEDGIS STDETTSNLE
301: SSDETEDLQM NYNDEIKVDP NASKQSQ
101: YGRTVLVMKP GIPNPYSVEM QMRYLVYCME NSILDLKSGQ EQMVWLIDFE GWNMSSISVK VTRETARILQ DCYPERLGLA ILYNPPKVFE SFWILVKPFL
201: EKRTYKKVKF VYPNDVDTQK VMEDLFDMDK LESCFGGKCT QGFDYVTYSN RMREGDKVMT DFVISGAPLP SDQYLTTLDN GFELSEDGIS STDETTSNLE
301: SSDETEDLQM NYNDEIKVDP NASKQSQ
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.