Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64923 | Soybean | nucleus | 52.68 | 58.6 |
| Solyc09g098600.2.1 | Tomato | cytosol | 51.73 | 53.77 |
| PGSC0003DMT400018571 | Potato | cytosol | 54.26 | 52.6 |
| VIT_18s0001g05080.t01 | Wine grape | nucleus | 57.41 | 50.42 |
| VIT_04s0023g01720.t01 | Wine grape | cytosol, mitochondrion | 39.12 | 42.76 |
| VIT_18s0001g12420.t01 | Wine grape | cytosol | 39.43 | 39.68 |
| VIT_01s0150g00170.t01 | Wine grape | cytosol | 21.14 | 27.24 |
| VIT_17s0000g00130.t01 | Wine grape | cytosol | 21.45 | 26.56 |
| VIT_01s0011g05850.t01 | Wine grape | cytosol | 17.67 | 23.05 |
| VIT_17s0000g08850.t01 | Wine grape | mitochondrion | 16.09 | 19.62 |
| VIT_05s0020g03350.t01 | Wine grape | cytosol | 20.82 | 15.6 |
Protein Annotations
| EntrezGene:100260491 | wikigene:100260491 | Gene3D:3.40.525.10 | MapMan:35.2 | EMBL:AM454774 | ProteinID:CAN59956 |
| ProteinID:CAN59956.1 | ProteinID:CCB55972 | ProteinID:CCB55972.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | UniProt:F6HMU7 | EMBL:FN595995 | InterPro:IPR001251 | InterPro:IPR036865 | EntrezGene:LOC100260491 |
| wikigene:LOC100260491 | PFAM:PF00650 | PFAM:PF03765 | PRINTS:PR00180 | PFscan:PS50191 | PANTHER:PTHR10174 |
| PANTHER:PTHR10174:SF128 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | TIGR:TC63149 |
| UniParc:UPI00015CB61C | ArrayExpress:VIT_08s0056g00730 | EnsemblPlantsGene:VIT_08s0056g00730 | EnsemblPlants:VIT_08s0056g00730.t01 | unigene:Vvi.3142 | RefSeq:XP_002270751 |
| RefSeq:XP_002270751.2 | RefSeq:XP_010653139.1 | : | : | : | : |
Description
No Description!
Coordinates
chr8:+:1048013..1059360
Molecular Weight (calculated)
36383.4 Da
IEP (calculated)
8.280
GRAVY (calculated)
-0.714
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSKKVRGSA GEKTLSPEEQ EAKINEIRKL IGPATSKVPV PCSDDIISRY LRARNWNTKK ATKMLKDTVK WRMEHKPEKI RWEDIAQEAE TGKIYRANYH
101: DKQGRTVLVM RPGFQNTNST KGQIKYLVYC IENALMNLNP DQEEMVWLID FQGWTMSSIS MRVTRETANI LQDHYPDRLG LAILYNPPKI FESFWTMVRP
201: FLETKTYQKV KFVYSNDAVS QKKMEELFDM DTLESSFGGR NSTGFNYETY AKQMMEDDKK MDNFINSGCS SLHFQPSFMA SEASDGGGIA SSHENPPVSC
301: KDVPKIEADM PKEMQKG
101: DKQGRTVLVM RPGFQNTNST KGQIKYLVYC IENALMNLNP DQEEMVWLID FQGWTMSSIS MRVTRETANI LQDHYPDRLG LAILYNPPKI FESFWTMVRP
201: FLETKTYQKV KFVYSNDAVS QKKMEELFDM DTLESSFGGR NSTGFNYETY AKQMMEDDKK MDNFINSGCS SLHFQPSFMA SEASDGGGIA SSHENPPVSC
301: KDVPKIEADM PKEMQKG
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.