Factsheet for VIT_17s0000g08850.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g112640.2.1	Tomato	plastid	68.85	68.32
KRH57102	Soybean	cytosol, plastid	68.46	67.94
KRH03256	Soybean	endoplasmic reticulum, plastid	68.08	67.56
PGSC0003DMT400046785	Potato	mitochondrion	66.92	66.41
GSMUA_Achr3P14480_001	Banana	mitochondrion	65.77	65.27
CDX87279	Canola	plastid	63.46	64.96
Bra035864.1-P	Field mustard	plastid	63.08	64.57
CDY16746	Canola	plastid	63.08	64.57
AT5G63060.1	Thale cress	plastid	63.08	62.36
KXG19106	Sorghum	plastid	61.15	62.11
Os02t0321500-01	Rice	mitochondrion	62.31	62.07
TraesCS7A01G460600.1	Wheat	mitochondrion, plastid	61.92	61.45
HORVU0Hr1G022240.10	Barley	mitochondrion	61.15	60.69
Zm00001d045573_P004	Maize	plastid	33.08	53.42
TraesCS7B01G361800.2	Wheat	mitochondrion, plastid	60.77	51.63
TraesCS7D01G448500.3	Wheat	mitochondrion, plastid	61.15	51.29
Zm00001d045574_P002	Maize	plastid	60.38	30.54
VIT_17s0000g00130.t01	Wine grape	cytosol	22.69	23.05
VIT_01s0011g05850.t01	Wine grape	cytosol	20.38	21.81
VIT_04s0023g01720.t01	Wine grape	cytosol, mitochondrion	24.23	21.72
VIT_01s0150g00170.t01	Wine grape	cytosol	19.62	20.73
VIT_18s0001g12420.t01	Wine grape	cytosol	22.69	18.73
VIT_18s0001g05080.t01	Wine grape	nucleus	24.23	17.45
VIT_08s0056g00730.t01	Wine grape	cytosol	19.62	16.09
VIT_05s0020g03350.t01	Wine grape	cytosol	18.08	11.11

Protein Annotations

EntrezGene:100263783	wikigene:100263783	Gene3D:3.40.525.10	MapMan:35.2	ProteinID:CBI14989	ProteinID:CBI14989.3
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	UniProt:D7SHM9	EMBL:FN594950	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:IPR001251
InterPro:IPR036865	EntrezGene:LOC100263783	wikigene:LOC100263783	PFAM:PF00650	PFscan:PS50191	PANTHER:PTHR10174
PANTHER:PTHR10174:SF197	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI00015C8C32	ArrayExpress:VIT_17s0000g08850
EnsemblPlantsGene:VIT_17s0000g08850	EnsemblPlants:VIT_17s0000g08850.t01	RefSeq:XP_003634267	RefSeq:XP_003634267.1	SEG:seg	:

Description

No Description!

Coordinates

chr17:-:10303532..10307730

Molecular Weight (calculated)

30269.8 Da

IEP (calculated)

9.038

GRAVY (calculated)

-0.237

Length

260 amino acids

Sequence
(BLAST)

001: MAMRLSHPLR PSSLPKFQFR PKSLSTCKFS IQNRISNSDN SRKLVMEVKE KLEKDQHSLP VGRNGRDDED MILWFLKDRK FSVEDAVAKL TKAIKWRQEF
101: GVSELHEESV RIVAETGKAY VHDFLDVNDR PVLIVVASKH FPAMQDPIED EKLCVFLIEK VLSKLPAGKE QILGIIDLRG FGTENADLKF LTFLFDVFYY
201: YYPRRVGQVL FVEAPFVFKP IWQLVKPLLK SYASLVRFCS METVRKEYFT EESFPASFRD

Best Arabidopsis Sequence Match ( AT5G63060.1 )
(BLAST)

001: MSIRFSSTIV AASVNFKSSK NLNINRSRNC RFSVRSCVSE SQHAHKLVLE VKERLAKDCT SLPLGKYGRD DEDMILWFLK DRRFSVDEAI GKLTKAIKWR
101: HEFKVDELSE DSIKAATDTG KAYVHGFLDV KGRPVVIVAP AKHIPGLLDP IEDEKLCVFL LEKALSKLPA GQHKILGIFD LRGFGSQNAD LKFLTFLFDV
201: FYYYYPSRLD EVLFVDAPFI FQPIWQFTKP LVKQYASLVK FCSAETVRKE YFTEETLPSN FRS

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4K975]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.