Factsheet for GSMUA_Achr3P14480_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0321500-01	Rice	mitochondrion	69.08	69.35
HORVU0Hr1G022240.10	Barley	mitochondrion	68.32	68.32
KXG19106	Sorghum	plastid	66.41	67.97
TraesCS7A01G460600.1	Wheat	mitochondrion, plastid	67.18	67.18
VIT_17s0000g08850.t01	Wine grape	mitochondrion	65.27	65.77
Zm00001d045573_P004	Maize	plastid	38.93	63.35
KRH03256	Soybean	endoplasmic reticulum, plastid	61.83	61.83
PGSC0003DMT400046785	Potato	mitochondrion	61.83	61.83
Solyc03g112640.2.1	Tomato	plastid	61.45	61.45
KRH57102	Soybean	cytosol, plastid	61.07	61.07
CDX87279	Canola	plastid	56.49	58.27
TraesCS7B01G361800.2	Wheat	mitochondrion, plastid	67.94	58.17
CDY16746	Canola	plastid	56.11	57.87
Bra035864.1-P	Field mustard	plastid	56.11	57.87
TraesCS7D01G448500.3	Wheat	mitochondrion, plastid	67.56	57.1
AT5G63060.1	Thale cress	plastid	57.25	57.03
Zm00001d045574_P002	Maize	plastid	67.18	34.24
GSMUA_Achr8P00480_001	Banana	cytosol	19.47	22.77
GSMUA_Achr11P...	Banana	cytosol	20.23	21.54
GSMUA_Achr4P15920_001	Banana	cytosol	19.08	19.01
GSMUA_AchrUn_...	Banana	cytosol	20.61	18.95
GSMUA_Achr8P26360_001	Banana	cytosol	20.23	17.85
GSMUA_Achr4P03190_001	Banana	cytosol	18.7	17.5
GSMUA_Achr3P04420_001	Banana	cytosol	22.14	17.37
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	19.85	16.51
GSMUA_Achr8P01630_001	Banana	cytosol	20.61	15.52
GSMUA_Achr10P...	Banana	nucleus	20.99	14.44
GSMUA_Achr9P17070_001	Banana	cytosol	21.37	13.53
GSMUA_Achr3P29630_001	Banana	cytosol	19.08	11.68
GSMUA_Achr7P27040_001	Banana	cytosol	19.08	11.49
GSMUA_Achr6P25200_001	Banana	cytosol	16.79	10.33
GSMUA_Achr5P08620_001	Banana	nucleus	17.56	9.91

Protein Annotations

Gene3D:3.40.525.10	MapMan:35.2	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	EnsemblPlantsGene:GSMUA_Achr3G14480_001
EnsemblPlants:GSMUA_Achr3P14480_001	EnsemblPlants:GSMUA_Achr3T14480_001	InterPro:IPR001251	InterPro:IPR036865	UniProt:M0SEL5	PFAM:PF00650
PFscan:PS50191	PANTHER:PTHR10174	PANTHER:PTHR10174:SF197	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI0002954CF1	SEG:seg	:	:	:	:

Description

SEC14 cytosolic factor family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G14480_001]

Coordinates

chr3:-:13851467..13858151

Molecular Weight (calculated)

30197.5 Da

IEP (calculated)

6.673

GRAVY (calculated)

-0.184

Length

262 amino acids

Sequence
(BLAST)

001: MALLRFRYPL SLPLSSLSSS SPAHGCRRFR CAAGNQALFS VDATKLVLEV KEKLEREHPN LPVGKNGRDD EDMILWFLKD RKFSVEEAVM KLTKAIKWHE
101: DFGVSDLCEE SVKSVYGTGK AYVHDFLDNN GRPVLVVVAS KHFPAKQEPI EDEKLCVYLI ETALNKLPPG TEEILGIFDL RGFRVENGDV QFLKFLMDVF
201: YYYYPRRLGQ VLFVDAPFVF QPIWQLVKPL MRSYASLVRF CDMETVRKEY FTESTVPTDF KD

Best Arabidopsis Sequence Match ( AT5G63060.1 )
(BLAST)

001: MSIRFSSTIV AASVNFKSSK NLNINRSRNC RFSVRSCVSE SQHAHKLVLE VKERLAKDCT SLPLGKYGRD DEDMILWFLK DRRFSVDEAI GKLTKAIKWR
101: HEFKVDELSE DSIKAATDTG KAYVHGFLDV KGRPVVIVAP AKHIPGLLDP IEDEKLCVFL LEKALSKLPA GQHKILGIFD LRGFGSQNAD LKFLTFLFDV
201: FYYYYPSRLD EVLFVDAPFI FQPIWQFTKP LVKQYASLVK FCSAETVRKE YFTEETLPSN FRS

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4K975]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.