Factsheet for GSMUA_Achr8P26360_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	74.75	77.89
GSMUA_Achr4P03190_001	Banana	cytosol	63.3	67.14
KRH15219	Soybean	cytosol	61.95	64.34
KRH51858	Soybean	nucleus, plastid	43.77	64.04
KRH05807	Soybean	cytosol	62.29	63.14
VIT_04s0023g01720.t01	Wine grape	cytosol, mitochondrion	61.62	63.1
PGSC0003DMT400013200	Potato	cytosol	60.61	62.72
Solyc12g089130.1.1	Tomato	cytosol	49.16	62.66
Solyc04g080290.2.1	Tomato	cytosol	59.93	62.02
PGSC0003DMT400038571	Potato	cytosol	54.55	60.45
CDX73146	Canola	cytosol	58.59	60.21
Solyc02g085300.2.1	Tomato	cytosol	43.43	59.72
KRH61179	Soybean	cytosol	35.69	58.56
AT1G75170.1	Thale cress	cytosol	57.58	57.77
KRH08288	Soybean	cytosol	57.58	57.77
KXG37682	Sorghum	cytosol	56.9	57.68
VIT_18s0001g12420.t01	Wine grape	cytosol	60.94	57.46
KRH69927	Soybean	cytosol	57.24	57.43
CDY24776	Canola	cytosol	55.56	56.31
Bra010566.1-P	Field mustard	cytosol	55.56	56.31
Bra011696.1-P	Field mustard	nucleus	54.88	56.21
CDY65854	Canola	nucleus	54.55	56.06
CDY42697	Canola	cytosol	54.21	55.71
CDY35466	Canola	cytosol	54.88	55.63
Os03t0724100-01	Rice	cytosol	55.89	55.52
HORVU4Hr1G074380.1	Barley	cytosol	25.93	55.4
CDX72592	Canola	cytosol	53.87	55.36
Bra017768.1-P	Field mustard	cytosol	53.87	55.36
TraesCS4D01G055100.1	Wheat	cytosol	38.38	54.55
AT4G36640.3	Thale cress	cytosol	53.87	54.42
EER93541	Sorghum	cytosol	54.21	54.21
TraesCS4A01G259700.1	Wheat	cytosol	53.2	54.11
TraesCS4D01G055200.1	Wheat	cytosol	53.2	54.11
HORVU4Hr1G005090.2	Barley	cytosol	23.57	53.85
TraesCS4B01G055000.1	Wheat	cytosol	52.53	53.42
HORVU4Hr1G009310.1	Barley	cytosol	52.53	53.42
HORVU4Hr1G009210.2	Barley	cytosol	52.53	53.42
HORVU6Hr1G021650.1	Barley	cytosol, mitochondrion, nucleus	24.92	53.24
TraesCS4D01G055400.1	Wheat	cytosol	52.19	53.08
Zm00001d033836_P001	Maize	nucleus	52.53	52.88
HORVU5Hr1G114590.3	Barley	mitochondrion	21.55	52.46
TraesCS4B01G055200.1	Wheat	cytosol	51.52	52.4
TraesCS4A01G259500.1	Wheat	cytosol	51.18	52.05
TraesCS4A01G259600.1	Wheat	cytosol	50.51	51.37
TraesCS4D01G055300.1	Wheat	cytosol	50.51	51.37
HORVU4Hr1G009190.1	Barley	cytosol	50.51	51.37
CDX75583	Canola	cytosol	26.94	50.96
TraesCS4B01G055100.1	Wheat	cytosol	48.48	50.88
KXG37681	Sorghum	cytosol	51.85	49.84
TraesCS7B01G089700.1	Wheat	cytosol	47.14	49.47
HORVU3Hr1G080050.1	Barley	cytosol, mitochondrion, plastid	25.59	48.72
HORVU5Hr1G020290.3	Barley	plastid	24.58	47.71
Bra015863.1-P	Field mustard	cytosol	58.25	45.05
CDY45413	Canola	cytosol	58.25	44.94
Zm00001d033837_P001	Maize	plastid	43.43	43.29
GSMUA_Achr8P01630_001	Banana	cytosol	47.81	40.8
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	42.76	40.32
GSMUA_Achr3P04420_001	Banana	cytosol	43.77	38.92
GSMUA_Achr10P...	Banana	nucleus	45.79	35.7
GSMUA_Achr9P17070_001	Banana	cytosol	44.78	32.13
GSMUA_Achr11P...	Banana	cytosol	24.24	29.27
GSMUA_Achr8P00480_001	Banana	cytosol	18.86	25.0
GSMUA_Achr4P15920_001	Banana	cytosol	20.88	23.57
GSMUA_Achr3P14480_001	Banana	mitochondrion	17.85	20.23
GSMUA_Achr7P27040_001	Banana	cytosol	22.22	15.17
GSMUA_Achr3P29630_001	Banana	cytosol	21.55	14.95
GSMUA_Achr6P25200_001	Banana	cytosol	20.88	14.55
GSMUA_Achr5P08620_001	Banana	nucleus	21.55	13.79

Protein Annotations

EnsemblPlants:GSMUA_Achr8P26360_001	EnsemblPlants:GSMUA_Achr8T26360_001	EnsemblPlantsGene:GSMUA_Achr8G26360_001	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF206
PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938
SUPFAM:SSF52087	UniParc:UPI000294E31B	UniProt:M0TTT9	MapMan:35.2	:	:

Description

SEC14 cytosolic factor family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G26360_001]

Coordinates

chr8:+:29966609..29968525

Molecular Weight (calculated)

34509.7 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.688

Length

297 amino acids

Sequence
(BLAST)

001: MFGRKHNSHD DQDHAALPHQ EKVEELRAAI GPLSGRSFMF CTDACLRRYL EAWNWNVDKS KKMLEETLEW RATYKPEEIR WPEVATEGET GKVYRADFHD
101: REGKSVLVLR PGRQNTCSHD SQLRHLVYLL ENAIINLPQG QEQMVWLIDF TGWSLRNSVP IKTARETANV LQSHYPERLA AAFLYNPPRI FESFWKIVKY
201: FLDPKTCEKV KFVYPNKEES MEVLRKSFDF QMLPEDFGGE SNVHYDHEEF ARLMAKDDAK TAAIWGEDHA AGASEVAHLV SMNENSNSKK EQVKTTR

Best Arabidopsis Sequence Match ( AT1G75170.1 )
(BLAST)

001: MFRWKNSSQT EQEQKEAALR EAKMKELKTL IGQLSGRNSL YCSDACLKRY LEARNWNVGK AKKMLEETLK WRSSFKPEEI RWNEVSGEGE TGKVYKAGFH
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.