Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73146 | Canola | cytosol | 88.18 | 90.31 |
| Solyc12g089130.1.1 | Tomato | cytosol | 57.09 | 72.53 |
| Solyc04g080290.2.1 | Tomato | cytosol | 70.27 | 72.47 |
| PGSC0003DMT400013200 | Potato | cytosol | 69.59 | 71.78 |
| Bra015863.1-P | Field mustard | cytosol | 89.86 | 69.27 |
| CDY45413 | Canola | cytosol | 89.86 | 69.09 |
| KRH15219 | Soybean | cytosol | 64.86 | 67.13 |
| KRH05807 | Soybean | cytosol | 66.22 | 66.89 |
| GSMUA_AchrUn_... | Banana | cytosol | 62.5 | 64.91 |
| KRH51858 | Soybean | nucleus, plastid | 42.91 | 62.56 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 58.11 | 61.43 |
| KRH61179 | Soybean | cytosol | 36.82 | 60.22 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 57.77 | 57.58 |
| AT4G36640.3 | Thale cress | cytosol | 56.42 | 56.8 |
| KXG37682 | Sorghum | cytosol | 55.74 | 56.31 |
| EER93541 | Sorghum | cytosol | 55.74 | 55.56 |
| TraesCS4D01G055200.1 | Wheat | cytosol | 52.7 | 53.42 |
| TraesCS4A01G259700.1 | Wheat | cytosol | 52.7 | 53.42 |
| TraesCS4B01G055000.1 | Wheat | cytosol | 52.36 | 53.08 |
| HORVU4Hr1G074380.1 | Barley | cytosol | 24.66 | 52.52 |
| HORVU4Hr1G009210.2 | Barley | cytosol | 51.69 | 52.4 |
| Os03t0724100-01 | Rice | cytosol | 52.7 | 52.17 |
| TraesCS4D01G055100.1 | Wheat | cytosol | 36.82 | 52.15 |
| Zm00001d033836_P001 | Maize | nucleus | 51.69 | 51.86 |
| TraesCS4D01G055400.1 | Wheat | cytosol | 51.01 | 51.71 |
| HORVU4Hr1G009190.1 | Barley | cytosol | 50.68 | 51.37 |
| TraesCS4A01G259600.1 | Wheat | cytosol | 50.68 | 51.37 |
| TraesCS4B01G055100.1 | Wheat | cytosol | 48.99 | 51.24 |
| HORVU4Hr1G009310.1 | Barley | cytosol | 50.34 | 51.03 |
| TraesCS4D01G055300.1 | Wheat | cytosol | 50.0 | 50.68 |
| TraesCS4A01G259500.1 | Wheat | cytosol | 50.0 | 50.68 |
| KXG37681 | Sorghum | cytosol | 52.36 | 50.16 |
| TraesCS4B01G055200.1 | Wheat | cytosol | 49.32 | 50.0 |
| HORVU4Hr1G005090.2 | Barley | cytosol | 21.96 | 50.0 |
| HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 23.31 | 49.64 |
| HORVU5Hr1G114590.3 | Barley | mitochondrion | 20.27 | 49.18 |
| TraesCS7B01G089700.1 | Wheat | cytosol | 46.28 | 48.41 |
| HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 23.65 | 44.87 |
| HORVU5Hr1G020290.3 | Barley | plastid | 22.97 | 44.44 |
| AT1G22180.4 | Thale cress | cytosol | 45.95 | 43.31 |
| Zm00001d033837_P001 | Maize | plastid | 42.57 | 42.28 |
| AT4G08690.2 | Thale cress | cytosol | 41.55 | 40.86 |
| AT1G01630.1 | Thale cress | cytosol | 21.96 | 25.49 |
| AT1G14820.3 | Thale cress | cytosol | 19.93 | 23.41 |
| AT5G63060.1 | Thale cress | plastid | 19.93 | 22.43 |
| AT3G22410.1 | Thale cress | cytosol | 21.28 | 15.75 |
| AT1G05370.1 | Thale cress | cytosol | 20.95 | 14.87 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.2 | EntrezGene:843854 | ProteinID:AAG12683.1 | ProteinID:AEE35679.1 | ProteinID:AEE35680.1 |
| EMBL:AK229440 | ArrayExpress:AT1G75170 | EnsemblPlantsGene:AT1G75170 | RefSeq:AT1G75170 | TAIR:AT1G75170 | RefSeq:AT1G75170-TAIR-G |
| EnsemblPlants:AT1G75170.1 | TAIR:AT1G75170.1 | EMBL:AY070085 | EMBL:AY091339 | Unigene:At.48375 | InterPro:CRAL-TRIO_dom |
| InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | RefSeq:NP_001031283.1 |
| RefSeq:NP_177653.1 | PFAM:PF00650 | PFAM:PF03765 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50191 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF206 |
| UniProt:Q9FRK8 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI00000A1207 |
Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]
Coordinates
chr1:+:28213666..28215887
Molecular Weight (calculated)
34344.8 Da
IEP (calculated)
8.200
GRAVY (calculated)
-0.637
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRWKNSSQT EQEQKEAALR EAKMKELKTL IGQLSGRNSL YCSDACLKRY LEARNWNVGK AKKMLEETLK WRSSFKPEEI RWNEVSGEGE TGKVYKAGFH
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.