Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33739 | Canola | cytosol | 84.92 | 84.58 |
| CDY51766 | Canola | cytosol | 81.75 | 84.08 |
| CDY45292 | Canola | cytosol | 81.75 | 84.08 |
| Bra026803.1-P | Field mustard | cytosol | 84.13 | 83.46 |
| Bra026185.1-P | Field mustard | cytosol | 80.56 | 82.86 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 85.32 | 70.72 |
| Solyc01g005260.2.1 | Tomato | cytosol | 63.49 | 66.67 |
| KRH70361 | Soybean | cytosol | 65.08 | 66.4 |
| VIT_01s0011g05850.t01 | Wine grape | cytosol | 63.49 | 65.84 |
| Solyc01g005270.2.1 | Tomato | cytosol | 62.3 | 65.42 |
| PGSC0003DMT400058687 | Potato | cytosol | 61.11 | 64.17 |
| Solyc01g005280.2.1 | Tomato | cytosol | 59.92 | 62.92 |
| PGSC0003DMT400058639 | Potato | cytosol | 49.21 | 61.08 |
| Solyc01g005290.2.1 | Tomato | cytosol | 47.62 | 60.61 |
| PGSC0003DMT400058685 | Potato | cytosol | 43.65 | 54.73 |
| PGSC0003DMT400058682 | Potato | cytosol | 61.11 | 54.42 |
| CDX81672 | Canola | cytosol | 81.35 | 53.39 |
| AT1G01630.1 | Thale cress | cytosol | 36.9 | 36.47 |
| AT4G08690.2 | Thale cress | cytosol | 24.21 | 20.27 |
| AT1G75170.1 | Thale cress | cytosol | 23.41 | 19.93 |
| AT4G36640.3 | Thale cress | cytosol | 22.22 | 19.05 |
| AT1G22180.4 | Thale cress | cytosol | 22.62 | 18.15 |
| AT5G63060.1 | Thale cress | plastid | 17.86 | 17.11 |
| AT3G22410.1 | Thale cress | cytosol | 19.84 | 12.5 |
| AT1G05370.1 | Thale cress | cytosol | 19.84 | 11.99 |
Protein Annotations
| Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | MapMan:35.2 | EntrezGene:838047 | UniProt:A0A178WEC2 | ProteinID:AEE29229.1 |
| EMBL:AK317267 | ArrayExpress:AT1G14820 | EnsemblPlantsGene:AT1G14820 | RefSeq:AT1G14820 | TAIR:AT1G14820 | RefSeq:AT1G14820-TAIR-G |
| EnsemblPlants:AT1G14820.3 | TAIR:AT1G14820.3 | Unigene:At.41951 | UniProt:B9DGS8 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003942 | GO:GO:0004073 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008652 | GO:GO:0009058 | GO:GO:0009086 | GO:GO:0009088 |
| GO:GO:0009089 | GO:GO:0009097 | GO:GO:0009987 | GO:GO:0016620 | GO:GO:0046983 | GO:GO:0050661 |
| GO:GO:0051287 | GO:GO:0055114 | InterPro:IPR001251 | InterPro:IPR036865 | RefSeq:NP_973831.1 | ProteinID:OAP15382.1 |
| PFAM:PF00650 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50191 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF121 | SMART:SM00516 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | UniParc:UPI0000162D84 | : | : | : | : |
Description
AT1G14820 protein [Source:UniProtKB/TrEMBL;Acc:B9DGS8]
Coordinates
chr1:-:5104975..5107107
Molecular Weight (calculated)
28300.2 Da
IEP (calculated)
7.434
GRAVY (calculated)
-0.203
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MEESQELALT QLRKSVEKLS SSTEGYDKPT LMRFLVARSM DPVKAAKMFV DWQKWRASMV PPTGFIPESE VQDELEFRKV CLQGPTKSGH PLVLVITSKH
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.