Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90694 | Canola | cytosol | 88.7 | 86.41 |
| Bra000655.1-P | Field mustard | cytosol | 88.04 | 85.76 |
| CDY05023 | Canola | cytosol | 89.37 | 85.67 |
| CDY12289 | Canola | cytosol | 56.15 | 80.09 |
| AT1G22180.4 | Thale cress | cytosol | 60.13 | 57.64 |
| KRH18888 | Soybean | cytosol | 60.47 | 54.65 |
| KRH16691 | Soybean | cytosol | 59.8 | 54.22 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 55.48 | 53.02 |
| KRH53100 | Soybean | cytosol | 48.17 | 52.92 |
| VIT_18s0001g05080.t01 | Wine grape | nucleus | 62.46 | 52.08 |
| GSMUA_Achr3P04420_001 | Banana | cytosol | 56.81 | 51.2 |
| KRH62380 | Soybean | cytosol | 46.51 | 51.09 |
| PGSC0003DMT400024527 | Potato | cytosol | 55.81 | 50.91 |
| Solyc04g072810.2.1 | Tomato | cytosol | 52.82 | 48.77 |
| Zm00001d052231_P003 | Maize | cytosol | 50.83 | 43.71 |
| EES05517 | Sorghum | cytosol | 50.83 | 43.71 |
| KRH62383 | Soybean | cytosol | 49.5 | 43.44 |
| Os02t0752000-01 | Rice | cytosol | 54.15 | 43.12 |
| AT1G75170.1 | Thale cress | cytosol | 40.86 | 41.55 |
| AT4G36640.3 | Thale cress | cytosol | 40.53 | 41.5 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 54.15 | 41.48 |
| HORVU6Hr1G075070.1 | Barley | nucleus | 54.15 | 40.45 |
| TraesCS6A01G302200.1 | Wheat | nucleus | 53.82 | 40.2 |
| TraesCS6B01G331400.1 | Wheat | nucleus | 52.82 | 39.45 |
| AT1G01630.1 | Thale cress | cytosol | 20.93 | 24.71 |
| AT1G14820.3 | Thale cress | cytosol | 20.27 | 24.21 |
| AT5G63060.1 | Thale cress | plastid | 19.6 | 22.43 |
| AT1G05370.1 | Thale cress | cytosol | 22.26 | 16.07 |
| AT3G22410.1 | Thale cress | cytosol | 21.26 | 16.0 |
Protein Annotations
| Gene3D:3.40.525.10 | MapMan:35.2 | EntrezGene:826436 | UniProt:A0A178UVA8 | ProteinID:AAB81870.2 | ProteinID:AEE82669.1 |
| ProteinID:AEE82670.1 | EMBL:AK227378 | EMBL:AK317442 | ProteinID:ANM66309.1 | ArrayExpress:AT4G08690 | EnsemblPlantsGene:AT4G08690 |
| RefSeq:AT4G08690 | TAIR:AT4G08690 | RefSeq:AT4G08690-TAIR-G | EnsemblPlants:AT4G08690.2 | TAIR:AT4G08690.2 | Unigene:At.71122 |
| EMBL:BT003080 | ProteinID:CAB77994.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf |
| InterPro:IPR001251 | InterPro:IPR036865 | RefSeq:NP_001031598.1 | RefSeq:NP_001328215.1 | RefSeq:NP_192609.1 | UniProt:O22270 |
| ProteinID:OAO97460.1 | PFAM:PF00650 | PFAM:PF03765 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PFscan:PS50191 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF202 | SMART:SM00516 |
| SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI000000BED0 | SEG:seg | : |
Description
AT4G08690 protein [Source:UniProtKB/TrEMBL;Acc:O22270]
Coordinates
chr4:-:5551315..5553062
Molecular Weight (calculated)
34435.0 Da
IEP (calculated)
6.124
GRAVY (calculated)
-0.587
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTNPVTNGF VKPVPTEEEQ AKIEEVRKLL GPLPEKLSSF CSDDAVLRYL RARNWHVKKA TKMLKETLKW RVQYKPEEIC WEEVAGEAET GKIYRSSCVD
101: KLGRPVLIMR PSVENSKSVK GQIRYLVYCM ENAVQNLPPG EEQMVWMIDF HGYSLANVSL RTTKETAHVL QEHYPERLAF AVLYNPPKFF EPFWKVARPF
201: LEPKTRNKVK FVYSDDPNTK VIMEENFDME KMELAFGGND DSGFNIEKHS ERMKEDDKKR LASLEGIVSA SLDSLSILSV SDGTASNSAH PSSHDVSEDE
301: H
101: KLGRPVLIMR PSVENSKSVK GQIRYLVYCM ENAVQNLPPG EEQMVWMIDF HGYSLANVSL RTTKETAHVL QEHYPERLAF AVLYNPPKFF EPFWKVARPF
201: LEPKTRNKVK FVYSDDPNTK VIMEENFDME KMELAFGGND DSGFNIEKHS ERMKEDDKKR LASLEGIVSA SLDSLSILSV SDGTASNSAH PSSHDVSEDE
301: H
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.