Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 67.96 | 72.06 |
| CDY38239 | Canola | cytosol | 11.68 | 61.9 |
| Bra012311.1-P | Field mustard | cytosol | 52.99 | 58.03 |
| CDY56380 | Canola | cytosol | 52.69 | 57.7 |
| CDY00428 | Canola | cytosol | 52.1 | 57.05 |
| AT4G08690.2 | Thale cress | cytosol | 51.2 | 56.81 |
| KRH18888 | Soybean | cytosol | 56.59 | 56.76 |
| KRH16691 | Soybean | cytosol | 55.99 | 56.33 |
| AT1G22180.4 | Thale cress | cytosol | 52.4 | 55.73 |
| CDY05023 | Canola | cytosol | 52.4 | 55.73 |
| Bra000655.1-P | Field mustard | cytosol | 51.2 | 55.34 |
| CDX90694 | Canola | cytosol | 50.9 | 55.02 |
| VIT_18s0001g05080.t01 | Wine grape | nucleus | 58.68 | 54.29 |
| CDY21345 | Canola | cytosol | 50.6 | 52.48 |
| Bra031370.1-P | Field mustard | cytosol | 50.6 | 52.48 |
| KRH53100 | Soybean | cytosol | 42.52 | 51.82 |
| Zm00001d052231_P003 | Maize | cytosol | 53.89 | 51.43 |
| EES05517 | Sorghum | cytosol | 53.59 | 51.14 |
| KRH62380 | Soybean | cytosol | 41.32 | 50.37 |
| Solyc04g072810.2.1 | Tomato | cytosol | 48.8 | 50.0 |
| CDY12289 | Canola | cytosol | 31.44 | 49.76 |
| Os02t0752000-01 | Rice | cytosol | 55.99 | 49.47 |
| PGSC0003DMT400024527 | Potato | cytosol | 48.8 | 49.39 |
| GSMUA_Achr8P01630_001 | Banana | cytosol | 50.9 | 48.85 |
| TraesCS6D01G281700.1 | Wheat | nucleus | 56.29 | 47.84 |
| CDY38240 | Canola | peroxisome | 20.36 | 46.9 |
| TraesCS6A01G302200.1 | Wheat | nucleus | 55.99 | 46.4 |
| TraesCS6B01G331400.1 | Wheat | nucleus | 55.69 | 46.15 |
| HORVU6Hr1G075070.1 | Barley | nucleus | 55.69 | 46.15 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.92 | 45.61 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 37.72 | 45.0 |
| KRH62383 | Soybean | cytosol | 46.11 | 44.9 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 38.92 | 43.77 |
| GSMUA_Achr10P... | Banana | nucleus | 48.5 | 42.52 |
| GSMUA_Achr9P17070_001 | Banana | cytosol | 48.2 | 38.89 |
| GSMUA_Achr11P... | Banana | cytosol | 20.06 | 27.24 |
| GSMUA_Achr8P00480_001 | Banana | cytosol | 17.07 | 25.45 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 17.96 | 22.81 |
| GSMUA_Achr3P14480_001 | Banana | mitochondrion | 17.37 | 22.14 |
| GSMUA_Achr7P27040_001 | Banana | cytosol | 18.56 | 14.25 |
| GSMUA_Achr3P29630_001 | Banana | cytosol | 17.66 | 13.79 |
| GSMUA_Achr5P08620_001 | Banana | nucleus | 18.56 | 13.36 |
| GSMUA_Achr6P25200_001 | Banana | cytosol | 16.77 | 13.15 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P04420_001 | EnsemblPlants:GSMUA_Achr3T04420_001 | EnsemblPlantsGene:GSMUA_Achr3G04420_001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF202 |
| PFAM:PF00650 | PFAM:PF03765 | PFscan:PS50191 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | UniParc:UPI0002957E2F | UniProt:M0SBR0 | MapMan:35.2 | : | : |
Description
CRAL/TRIO domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G04420_001]
Coordinates
chr3:+:2877723..2880873
Molecular Weight (calculated)
38325.5 Da
IEP (calculated)
6.521
GRAVY (calculated)
-0.589
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSIDSIANG SEKQALSEEQ RTKINEVRAS LGPLPDKLVC YSSDASIARY LTARNWNVTK ATKMLKETLK WHLEYKPEEI RWDEIAHEAE TGKIYRSSYS
101: DKFGRSILVM RPGYENTRST KGKIRYLVYC MENAILNLPP DQEQMVWLID FKGFNLSNIS IRTAKETADV LQNHYPERLG LAILYNPPKF FEPFWTIAKH
201: LLEPKTCRKV KFVYSDDDNT KKTMEEFFDM DELDCGFGGN NQVGFNISDY AARMKEDDKR MHFIWSQENA SSSSVQHETI MTNVSGNSGS DCDKSENGTP
301: GRFIVGMNND NFLLQSMLCN APLIVKFKEK MSSW
101: DKFGRSILVM RPGYENTRST KGKIRYLVYC MENAILNLPP DQEQMVWLID FKGFNLSNIS IRTAKETADV LQNHYPERLG LAILYNPPKF FEPFWTIAKH
201: LLEPKTCRKV KFVYSDDDNT KKTMEEFFDM DELDCGFGGN NQVGFNISDY AARMKEDDKR MHFIWSQENA SSSSVQHETI MTNVSGNSGS DCDKSENGTP
301: GRFIVGMNND NFLLQSMLCN APLIVKFKEK MSSW
001: MNTNPVTNGF VKPVPTEEEQ AKIEEVRKLL GPLPEKLSSF CSDDAVLRYL RARNWHVKKA TKMLKETLKW RVQYKPEEIC WEEVAGEAET GKIYRSSCVD
101: KLGRPVLIMR PSVENSKSVK GQIRYLVYCM ENAVQNLPPG EEQMVWMIDF HGYSLANVSL RTTKETAHVL QEHYPERLAF AVLYNPPKFF EPFWKVARPF
201: LEPKTRNKVK FVYSDDPNTK VIMEENFDME KMELAFGGND DSGFNIEKHS ERMKEDDKKR LASLEGIVSA SLDSLSILSV SDGTASNSAH PSSHDVSEDE
301: H
101: KLGRPVLIMR PSVENSKSVK GQIRYLVYCM ENAVQNLPPG EEQMVWMIDF HGYSLANVSL RTTKETAHVL QEHYPERLAF AVLYNPPKFF EPFWKVARPF
201: LEPKTRNKVK FVYSDDPNTK VIMEENFDME KMELAFGGND DSGFNIEKHS ERMKEDDKKR LASLEGIVSA SLDSLSILSV SDGTASNSAH PSSHDVSEDE
301: H
Arabidopsis Description
AT4G08690 protein [Source:UniProtKB/TrEMBL;Acc:O22270]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.