Factsheet for GSMUA_Achr5P08620_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P25200_001	Banana	cytosol	71.77	78.17
GSMUA_Achr7P27040_001	Banana	cytosol	65.52	69.89
GSMUA_Achr3P29630_001	Banana	cytosol	64.22	69.63
Os03t0219100-01	Rice	cytosol	62.07	65.75
VIT_05s0020g03350.t01	Wine grape	cytosol	56.25	61.7
Zm00001d048066_P001	Maize	cytosol	57.97	61.56
EER95261	Sorghum	cytosol	58.62	61.26
Zm00001d028231_P003	Maize	cytosol	59.27	60.84
KRH35529	Soybean	cytosol	51.08	58.66
TraesCS4D01G242900.1	Wheat	cytosol	56.47	58.35
TraesCS4A01G065900.1	Wheat	cytosol	57.54	58.17
TraesCS4B01G243300.1	Wheat	cytosol	56.47	57.96
KRG91288	Soybean	cytosol	50.43	57.92
PGSC0003DMT400077340	Potato	cytosol	51.51	56.5
Solyc09g075970.2.1	Tomato	cytosol	50.86	55.79
AT1G05370.1	Thale cress	cytosol	48.28	53.72
Bra039949.1-P	Field mustard	cytosol	46.12	53.37
CDY10026	Canola	cytosol	47.84	53.37
Bra032465.1-P	Field mustard	cytosol	47.84	53.37
CDY59787	Canola	cytosol	47.63	53.12
CDY64658	Canola	cytosol	38.58	52.49
Bra015421.1-P	Field mustard	cytosol	45.47	52.49
AT3G22410.1	Thale cress	cytosol	44.83	52.0
Bra023828.1-P	Field mustard	nucleus	44.18	50.62
HORVU4Hr1G067410.4	Barley	plastid	52.8	49.1
CDY71148	Canola	cytosol, mitochondrion, nucleus, plastid	33.62	49.06
CDY10103	Canola	extracellular	28.02	48.33
CDY38325	Canola	cytosol	38.15	47.71
CDY10638	Canola	nucleus	32.33	39.89
GSMUA_Achr4P03190_001	Banana	cytosol	14.44	23.93
GSMUA_AchrUn_...	Banana	cytosol	14.01	22.81
GSMUA_Achr8P00480_001	Banana	cytosol	10.56	21.88
GSMUA_Achr8P26360_001	Banana	cytosol	13.79	21.55
GSMUA_Achr11P...	Banana	cytosol	11.42	21.54
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	14.01	20.63
GSMUA_Achr8P01630_001	Banana	cytosol	14.87	19.83
GSMUA_Achr10P...	Banana	nucleus	15.52	18.9
GSMUA_Achr4P15920_001	Banana	cytosol	10.56	18.63
GSMUA_Achr3P04420_001	Banana	cytosol	13.36	18.56
GSMUA_Achr3P14480_001	Banana	mitochondrion	9.91	17.56
GSMUA_Achr9P17070_001	Banana	cytosol	15.3	17.15

Protein Annotations

EnsemblPlants:GSMUA_Achr5P08620_001	EnsemblPlants:GSMUA_Achr5T08620_001	EnsemblPlantsGene:GSMUA_Achr5G08620_001	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF132	PFAM:PF00650
PFscan:PS50191	SEG:seg	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000294D3EC	UniProt:M0SWU1
MapMan:35.2	:	:	:	:	:

Description

SEC14 cytosolic factor family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G08620_001]

Coordinates

chr5:+:6279510..6281858

Molecular Weight (calculated)

51303.3 Da

IEP (calculated)

10.590

GRAVY (calculated)

-0.204

Length

464 amino acids

Sequence
(BLAST)

001: MGSTERKEPK ARARVEEVLR ALKKQAPLTA EQERFCSDAC VDRFLRAKGD SVKKAAKHLR TVLSWRESIG TELLLADEFS AELGDGMAYV AGHDDEARPV
101: LVFRIKQDDL KLRSHKSFVR LLVFTLEVAI STVARFVDQL VLLFDASKLI NTEIPYVSEV PHLSSSSHPV SNSELHYSVF LFVAGFFRSP KAFLNLFAGT
201: LKIISDYYPG RLHKAFVIDP PSLFSCLWKG VRPFIDLSAV TAVVSSLDFE DSLEDAALAS HPRTTSLRFH PSAAASAAKV GGSTSSRFSV TVSHLNSLKP
301: WYLSTTTTSS VVVPTASPSL IGASPLSARS FSFASPAARS TPRVGISAGA AITRSIPSTP SSAAPTRPPP QQQHPRTPMP SFLQSPATLF SFKKERQLSR
401: VERERESFLP FLRFYRRPYD ETAYRAKMRP PHGGLVSIVS LHDQPNKRRN KIQSFPVPSS QHRH

Best Arabidopsis Sequence Match ( AT1G05370.1 )
(BLAST)

001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.