CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032465.1-P	Field mustard	cytosol	97.6	97.6
CDY59787	Canola	cytosol	97.36	97.36
AT1G05370.1	Thale cress	cytosol	92.07	91.85
CDY64658	Canola	cytosol	74.28	90.62
CDY10103	Canola	extracellular	56.73	87.73
VIT_05s0020g03350.t01	Wine grape	cytosol	67.55	66.43
CDY38325	Canola	cytosol	49.52	55.53
GSMUA_Achr7P27040_001	Banana	cytosol	56.25	53.79
GSMUA_Achr3P29630_001	Banana	cytosol	55.05	53.5
CDY71148	Canola	cytosol, mitochondrion, nucleus, plastid	40.87	53.46
GSMUA_Achr6P25200_001	Banana	cytosol	52.64	51.41
Os03t0219100-01	Rice	cytosol	53.12	50.46
EER95261	Sorghum	cytosol	52.16	48.87
Zm00001d048066_P001	Maize	cytosol	50.48	48.05
GSMUA_Achr5P08620_001	Banana	nucleus	53.37	47.84
Zm00001d028231_P003	Maize	cytosol	51.68	47.57
TraesCS4D01G242900.1	Wheat	cytosol	51.2	47.44
TraesCS4B01G243300.1	Wheat	cytosol	50.96	46.9
TraesCS4A01G065900.1	Wheat	cytosol	51.2	46.41
CDY10638	Canola	nucleus	37.26	41.22
HORVU4Hr1G067410.4	Barley	plastid	46.63	38.88
CDY38239	Canola	cytosol	5.05	33.33
CDX90047	Canola	cytosol	14.9	24.31
CDY00428	Canola	cytosol	17.55	23.93
CDY15164	Canola	cytosol	14.66	23.92
CDY56380	Canola	cytosol	17.31	23.61
CDX90694	Canola	cytosol	16.59	22.33
CDY05023	Canola	cytosol	16.83	22.29
CDY38020	Canola	cytosol	13.94	22.14
CDY33738	Canola	cytosol	12.98	22.13
CDY21345	Canola	cytosol	17.07	22.05
CDY24776	Canola	cytosol	15.14	21.5
CDX81674	Canola	cytosol	12.5	21.31
CDY35466	Canola	cytosol	14.9	21.16
CDY45292	Canola	cytosol	12.26	20.82
CDY51766	Canola	cytosol	12.26	20.82
CDY65854	Canola	nucleus	14.42	20.76
CDX72592	Canola	cytosol	14.18	20.42
CDY42697	Canola	cytosol	14.18	20.42
CDX75583	Canola	cytosol	7.69	20.38
CDY33739	Canola	cytosol	12.26	20.16
CDX73146	Canola	cytosol	13.94	20.07
CDY38240	Canola	peroxisome	6.97	20.0
CDX87279	Canola	plastid	12.02	19.68
CDY16746	Canola	plastid	12.02	19.68
CDY12289	Canola	cytosol	9.13	18.01
CDX81673	Canola	endoplasmic reticulum, golgi	12.5	17.11
CDY45413	Canola	cytosol	14.42	15.58
CDX81672	Canola	cytosol	11.78	12.76

Protein Annotations

EnsemblPlants:CDY10026	EnsemblPlantsGene:GSBRNA2T00031809001	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom_sf
InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF132	PFAM:PF00650	PFscan:PS50191
ProteinID:CDY10026	ProteinID:CDY10026.1	SEG:seg	SMART:SM00516	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI0004EE86B6	UniProt:A0A078F9L3	MapMan:35.2	:	:	:

Description

BnaC08g44250DBnaC08g44250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9L3]

Coordinates

chrLK032000:+:520510..523399

Molecular Weight (calculated)

47539.9 Da

IEP (calculated)

10.328

GRAVY (calculated)

-0.339

Length

416 amino acids

Sequence
(BLAST)

001: MGKKEQKDHS TVESDDKVEA VLHLLRKHSP LTLKQEKFCN RACVSRFLRT KGDNVKRAAK QLRSCLSWRS SLGIESLIAD EFTAELAEGL AYVAGLDDEC
101: RPVLVFRIKQ DYQKLHTQKQ LIRLVVFTLE VAISTMSRNV EEFVILFDAS FFKSASAFMN ILVTTLRIVA EYYPCRLFKT FVIDPPSLFS YLWKGVRAFM
201: DLSPTTTIVS MLDFQDSYDY DDFSSSYPSR VSSLRFDKSP TKPTDKISSS ASSRFTFTVS RDGLDTVKPW CLTLTDTSSS SKLGHTSAYI SPLNARSFSF
301: ASPAARREPI DGPRRSFFAS TPMPARTSDR HSIGTLRDPR IPRPSFFQSP AVFFRRESHV SKSEKPRDTF VPFLKFYRRP YDEMTYRSKM RPPLGGLVSI
401: VSSQIRRRHV SLSQRF

Best Arabidopsis Sequence Match ( AT1G05370.1 )
(BLAST)

001: MGKKEQKDHH SVVESDDKVE AVLHLLRKHS PLTLKQEKFC NRACVGRFLR IKGDNVKKAA KQLRSCLSWR SSLGIESLIA DEFTAELAEG LAYVAGLDDE
101: CRPVLVFRIK QDYQKLHTQK QLTRLVVFTL EVAISTMSRN VEQFVILFDA SFFKSASAFM NILVTTLKIV AEYYPCRLFK TFVIDPPSLF SYLWKGIRTF
201: VDLSTATMIV SMQDFQDSFD YDDFSSSYPS RVSSLRFDTS SLKSTDKIGS CASSRFAFTV SRDGLDTVKP WCLTLTDTSS TKLGHNTGAY ISPLNARSFS
301: FASPAARSEP FGGPRRSFFA STPMPARTTD RHSIGTLRDP RIPRPSFFQS PAIFFRRESH VSKSEKPRDS FVQFLKFYRR PYDEMTYRSK MRPPLGGLVS
401: IVSTQIRRRH VSLSQRF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:F4I8Q8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.