Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45292 | Canola | cytosol | 98.78 | 98.78 |
| Bra026185.1-P | Field mustard | cytosol | 97.55 | 97.55 |
| CDY33739 | Canola | cytosol | 85.71 | 83.0 |
| AT1G14820.3 | Thale cress | cytosol | 84.08 | 81.75 |
| CDY33738 | Canola | cytosol | 75.92 | 76.23 |
| CDX81674 | Canola | cytosol | 74.29 | 74.59 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 85.71 | 69.08 |
| Solyc01g005260.2.1 | Tomato | cytosol | 62.86 | 64.17 |
| Solyc01g005270.2.1 | Tomato | cytosol | 62.04 | 63.33 |
| VIT_01s0011g05850.t01 | Wine grape | cytosol | 61.22 | 61.73 |
| KRH70361 | Soybean | cytosol | 61.22 | 60.73 |
| PGSC0003DMT400058687 | Potato | cytosol | 59.18 | 60.42 |
| PGSC0003DMT400058639 | Potato | cytosol | 49.39 | 59.61 |
| Solyc01g005290.2.1 | Tomato | cytosol | 47.76 | 59.09 |
| Solyc01g005280.2.1 | Tomato | cytosol | 57.55 | 58.75 |
| CDX81672 | Canola | cytosol | 84.49 | 53.91 |
| PGSC0003DMT400058685 | Potato | cytosol | 43.27 | 52.74 |
| PGSC0003DMT400058682 | Potato | cytosol | 59.18 | 51.24 |
| CDY15164 | Canola | cytosol | 35.51 | 34.12 |
| CDX90047 | Canola | cytosol | 35.1 | 33.73 |
| CDY38239 | Canola | cytosol | 8.16 | 31.75 |
| CDY38020 | Canola | cytosol | 33.88 | 31.68 |
| CDX73146 | Canola | cytosol | 24.08 | 20.42 |
| CDY24776 | Canola | cytosol | 23.27 | 19.45 |
| CDY05023 | Canola | cytosol | 24.9 | 19.43 |
| CDY00428 | Canola | cytosol | 24.08 | 19.34 |
| CDY35466 | Canola | cytosol | 22.86 | 19.11 |
| CDX90694 | Canola | cytosol | 23.67 | 18.77 |
| CDX87279 | Canola | plastid | 19.18 | 18.5 |
| CDY16746 | Canola | plastid | 19.18 | 18.5 |
| CDY56380 | Canola | cytosol | 22.86 | 18.36 |
| CDY42697 | Canola | cytosol | 21.63 | 18.34 |
| CDY65854 | Canola | nucleus | 21.63 | 18.34 |
| CDX72592 | Canola | cytosol | 21.22 | 17.99 |
| CDY21345 | Canola | cytosol | 21.63 | 16.46 |
| CDX75583 | Canola | cytosol | 10.2 | 15.92 |
| CDY45413 | Canola | cytosol | 24.08 | 15.32 |
| CDY12289 | Canola | cytosol | 12.24 | 14.22 |
| CDY10638 | Canola | nucleus | 20.0 | 13.03 |
| CDY59787 | Canola | cytosol | 20.82 | 12.26 |
| CDY10026 | Canola | cytosol | 20.82 | 12.26 |
| CDY38240 | Canola | peroxisome | 6.12 | 10.34 |
| CDY38325 | Canola | cytosol | 15.51 | 10.24 |
| CDY64658 | Canola | cytosol | 13.47 | 9.68 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 11.02 | 8.49 |
| CDY10103 | Canola | extracellular | 6.94 | 6.32 |
Protein Annotations
| EnsemblPlants:CDY51766 | EnsemblPlantsGene:GSBRNA2T00004196001 | Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF121 | PFAM:PF00650 |
| PFscan:PS50191 | ProteinID:CDY51766 | ProteinID:CDY51766.1 | SEG:seg | SMART:SM00516 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | UniParc:UPI0004EE8DDC | UniProt:A0A078IP75 | MapMan:35.2 | : | : |
Description
BnaC05g49490DBnaC05g49490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IP75]
Coordinates
chrLK033025:-:4167..5688
Molecular Weight (calculated)
27880.0 Da
IEP (calculated)
7.406
GRAVY (calculated)
-0.191
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MEESQELALT QLRTSVEKLS SSTEGYEKPT LMRFLVARSM NPDKAAKMFV DCQKWRASMV PPNGIPDSEV RDELEFGKIC LHGPTKSGHP LVLVLCSKHF
101: PAKNAVNFKK FVVYVLDKTI ASGIKEKEVG DEKLVAVFDL ANITYKNLDA RGLITSFQFL QSYYPERLAK CYMLHMPGFF VSVWRFVCRF LEKSTQEKIV
201: IVTDGEEEIK FKEEIGVDAL PEEYRGRAKL TLIQDVLLPK TAPEM
101: PAKNAVNFKK FVVYVLDKTI ASGIKEKEVG DEKLVAVFDL ANITYKNLDA RGLITSFQFL QSYYPERLAK CYMLHMPGFF VSVWRFVCRF LEKSTQEKIV
201: IVTDGEEEIK FKEEIGVDAL PEEYRGRAKL TLIQDVLLPK TAPEM
001: MVFVVVVSSE KGYDKPTLMR FLVARSMDPV KAAKMFVDWQ KWRASMVPPT GFIPESEVQD ELEFRKVCLQ GPTKSGHPLV LVITSKHFAS KDPANFKKFV
101: VYALDKTIAS GNNGKEVGGE KLVAVIDLAN ITYKNLDARG LITGFQFLQS YYPERLAKCY ILHMPGFFVT VWKFVCRFLE KATQEKIVIV TDGEEQRKFE
201: EEIGADALPE EYGGRAKLTA IQDVLLPQAA PVTLTNNNV
101: VYALDKTIAS GNNGKEVGGE KLVAVIDLAN ITYKNLDARG LITGFQFLQS YYPERLAKCY ILHMPGFFVT VWKFVCRFLE KATQEKIVIV TDGEEQRKFE
201: EEIGADALPE EYGGRAKLTA IQDVLLPQAA PVTLTNNNV
Arabidopsis Description
AT1G14820 protein [Source:UniProtKB/TrEMBL;Acc:B9DGS8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.