Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023828.1-P | Field mustard | nucleus | 98.74 | 77.53 |
| AT3G22410.1 | Thale cress | cytosol | 77.99 | 62.0 |
| CDY38325 | Canola | cytosol | 66.04 | 56.6 |
| CDY10103 | Canola | extracellular | 43.08 | 50.93 |
| CDY64658 | Canola | cytosol | 53.77 | 50.15 |
| KRG91288 | Soybean | cytosol | 55.03 | 43.32 |
| KRH35529 | Soybean | cytosol | 54.72 | 43.07 |
| CDY59787 | Canola | cytosol | 53.77 | 41.11 |
| CDY10026 | Canola | cytosol | 53.46 | 40.87 |
| Solyc09g075970.2.1 | Tomato | cytosol | 53.46 | 40.19 |
| PGSC0003DMT400077340 | Potato | cytosol | 53.46 | 40.19 |
| GSMUA_Achr3P29630_001 | Banana | cytosol | 49.06 | 36.45 |
| GSMUA_Achr7P27040_001 | Banana | cytosol | 49.69 | 36.32 |
| GSMUA_Achr6P25200_001 | Banana | cytosol | 48.43 | 36.15 |
| CDY10638 | Canola | nucleus | 40.57 | 34.31 |
| Os03t0219100-01 | Rice | cytosol | 46.86 | 34.02 |
| GSMUA_Achr5P08620_001 | Banana | nucleus | 49.06 | 33.62 |
| EER95261 | Sorghum | cytosol | 45.28 | 32.43 |
| Zm00001d028231_P003 | Maize | cytosol | 45.28 | 31.86 |
| TraesCS4D01G242900.1 | Wheat | cytosol | 44.65 | 31.63 |
| Zm00001d048066_P001 | Maize | cytosol | 43.4 | 31.58 |
| TraesCS4B01G243300.1 | Wheat | cytosol | 44.65 | 31.42 |
| TraesCS4A01G065900.1 | Wheat | cytosol | 44.97 | 31.15 |
| HORVU4Hr1G067410.4 | Barley | plastid | 45.28 | 28.86 |
| CDY38240 | Canola | peroxisome | 9.43 | 20.69 |
| CDY12289 | Canola | cytosol | 11.32 | 17.06 |
| CDY56380 | Canola | cytosol | 13.84 | 14.43 |
| CDY00428 | Canola | cytosol | 13.52 | 14.1 |
| CDX90047 | Canola | cytosol | 10.06 | 12.55 |
| CDY21345 | Canola | cytosol | 12.58 | 12.42 |
| CDX90694 | Canola | cytosol | 11.95 | 12.3 |
| CDY15164 | Canola | cytosol | 9.75 | 12.16 |
| CDY05023 | Canola | cytosol | 11.95 | 12.1 |
| CDY38020 | Canola | cytosol | 9.43 | 11.45 |
| CDX73146 | Canola | cytosol | 10.06 | 11.07 |
| CDY33739 | Canola | cytosol | 8.81 | 11.07 |
| CDY16746 | Canola | plastid | 8.81 | 11.02 |
| CDX87279 | Canola | plastid | 8.81 | 11.02 |
| CDY51766 | Canola | cytosol | 8.49 | 11.02 |
| CDY45292 | Canola | cytosol | 8.49 | 11.02 |
| CDY42697 | Canola | cytosol | 9.75 | 10.73 |
| CDX72592 | Canola | cytosol | 9.75 | 10.73 |
| CDY65854 | Canola | nucleus | 9.43 | 10.38 |
| CDX81674 | Canola | cytosol | 7.86 | 10.25 |
| CDY33738 | Canola | cytosol | 7.86 | 10.25 |
| CDY24776 | Canola | cytosol | 9.43 | 10.24 |
| CDY35466 | Canola | cytosol | 9.12 | 9.9 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 8.81 | 9.21 |
| CDY45413 | Canola | cytosol | 10.38 | 8.57 |
| CDX81672 | Canola | cytosol | 8.81 | 7.29 |
| CDY38239 | Canola | cytosol | 1.26 | 6.35 |
| CDX75583 | Canola | cytosol | 1.89 | 3.82 |
Protein Annotations
| EnsemblPlants:CDY71148 | EnsemblPlantsGene:GSBRNA2T00011745001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:IPR001251 |
| InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF132 | PFAM:PF00650 | PFscan:PS50191 | ProteinID:CDY71148 |
| ProteinID:CDY71148.1 | SEG:seg | SUPFAM:SSF52087 | UniParc:UPI0004EE281F | UniProt:A0A078JUC0 | MapMan:35.2 |
Description
BnaAnng36300DBnaAnng36300D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JUC0]
Coordinates
chrLK044677:+:38..2106
Molecular Weight (calculated)
35568.3 Da
IEP (calculated)
10.798
GRAVY (calculated)
-0.252
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: FDIQIFRFKN DYQKLRTQKQ FLRLVAFTME TAISSMSRNA ERRVVLLFDA SFFRSSSAFA NLLLPTLKII GDNYPCRLYK AFIIDPPSFF PYIWKGVRPF
101: VELSTLTTVI SSLDYDEQLD ISHVSLASSS SSSSSCPRSA SLRFDASSNK SAVASGSASS RFAFTVSHNS LKPWYLSFTD TSPLNAAVST AASKVSPISS
201: RSLSFASPAA RGLIDARQPA CMRKSVFPST PLQEKTKTET YRKTPRPSFF QSPAMFFRGG KNVGGGEKSS REAFVPYLKF YRRPYDETAY RSKLRGPRGF
301: VSVVSSHVRC RYASLSQR
101: VELSTLTTVI SSLDYDEQLD ISHVSLASSS SSSSSCPRSA SLRFDASSNK SAVASGSASS RFAFTVSHNS LKPWYLSFTD TSPLNAAVST AASKVSPISS
201: RSLSFASPAA RGLIDARQPA CMRKSVFPST PLQEKTKTET YRKTPRPSFF QSPAMFFRGG KNVGGGEKSS REAFVPYLKF YRRPYDETAY RSKLRGPRGF
301: VSVVSSHVRC RYASLSQR
001: MGKKDEKVEA VLRLVKKQSP LTFKQEKFCN RECVERFLKV KGDNVKKAAK QLSSCLSWRQ NFDIERLGAE EFSTELSDGV AYISGHDRES RPVIIFRFKH
101: DYQKLHTQKQ FTRLVAFTIE TAISSMSRNT EQSFVLLFDA SFFRSSSAFA NLLLATLKII ADNYPCRLYK AFIIDPPSFF SYLWKGVRPF VELSTATMIL
201: SSLDYDEPLD ITHVSSNPRS TSLRFDASSI KSTASIGSAS SRFAFTVSQN SLKPWYLSFT DTSPYNPAVS SSAAAPVSPL SARSLPFASP AVRGFKDAKP
301: AACRKSLFPS TPLPEKTKTV SYRKTPRPSF FQSPAMFFRR ENNVGGGGEK SREAFVPYLK FYRRPYDETA YRSKLRGPRG FLSVVSSHRR SRHVSLSQRF
101: DYQKLHTQKQ FTRLVAFTIE TAISSMSRNT EQSFVLLFDA SFFRSSSAFA NLLLATLKII ADNYPCRLYK AFIIDPPSFF SYLWKGVRPF VELSTATMIL
201: SSLDYDEPLD ITHVSSNPRS TSLRFDASSI KSTASIGSAS SRFAFTVSQN SLKPWYLSFT DTSPYNPAVS SSAAAPVSPL SARSLPFASP AVRGFKDAKP
301: AACRKSLFPS TPLPEKTKTV SYRKTPRPSF FQSPAMFFRR ENNVGGGGEK SREAFVPYLK FYRRPYDETA YRSKLRGPRG FLSVVSSHRR SRHVSLSQRF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9LUV9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.