Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026803.1-P | Field mustard | cytosol | 98.42 | 98.03 |
| CDY51766 | Canola | cytosol | 83.0 | 85.71 |
| CDY45292 | Canola | cytosol | 83.0 | 85.71 |
| AT1G14820.3 | Thale cress | cytosol | 84.58 | 84.92 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 96.05 | 79.93 |
| CDY33738 | Canola | cytosol | 76.68 | 79.51 |
| CDX81674 | Canola | cytosol | 74.31 | 77.05 |
| Solyc01g005260.2.1 | Tomato | cytosol | 64.03 | 67.5 |
| Solyc01g005270.2.1 | Tomato | cytosol | 62.85 | 66.25 |
| PGSC0003DMT400058687 | Potato | cytosol | 61.26 | 64.58 |
| VIT_01s0011g05850.t01 | Wine grape | cytosol | 61.66 | 64.2 |
| PGSC0003DMT400058639 | Potato | cytosol | 50.99 | 63.55 |
| Solyc01g005290.2.1 | Tomato | cytosol | 49.41 | 63.13 |
| KRH70361 | Soybean | cytosol | 61.26 | 62.75 |
| Solyc01g005280.2.1 | Tomato | cytosol | 59.29 | 62.5 |
| CDX81672 | Canola | cytosol | 86.17 | 56.77 |
| PGSC0003DMT400058685 | Potato | cytosol | 45.06 | 56.72 |
| PGSC0003DMT400058682 | Potato | cytosol | 61.26 | 54.77 |
| CDY15164 | Canola | cytosol | 36.36 | 36.08 |
| CDX90047 | Canola | cytosol | 35.97 | 35.69 |
| CDY38020 | Canola | cytosol | 34.39 | 33.21 |
| CDY38239 | Canola | cytosol | 6.32 | 25.4 |
| CDX73146 | Canola | cytosol | 22.92 | 20.07 |
| CDY24776 | Canola | cytosol | 22.53 | 19.45 |
| CDY35466 | Canola | cytosol | 22.13 | 19.11 |
| CDY05023 | Canola | cytosol | 22.92 | 18.47 |
| CDY42697 | Canola | cytosol | 20.55 | 17.99 |
| CDY65854 | Canola | nucleus | 20.55 | 17.99 |
| CDX90694 | Canola | cytosol | 21.74 | 17.8 |
| CDY00428 | Canola | cytosol | 21.34 | 17.7 |
| CDX72592 | Canola | cytosol | 20.16 | 17.65 |
| CDY56380 | Canola | cytosol | 20.55 | 17.05 |
| CDX87279 | Canola | plastid | 17.0 | 16.93 |
| CDY16746 | Canola | plastid | 17.0 | 16.93 |
| CDY21345 | Canola | cytosol | 20.55 | 16.15 |
| CDX75583 | Canola | cytosol | 9.88 | 15.92 |
| CDY45413 | Canola | cytosol | 22.92 | 15.06 |
| CDY12289 | Canola | cytosol | 12.25 | 14.69 |
| CDY38240 | Canola | peroxisome | 7.11 | 12.41 |
| CDY10026 | Canola | cytosol | 20.16 | 12.26 |
| CDY10638 | Canola | nucleus | 18.18 | 12.23 |
| CDY59787 | Canola | cytosol | 19.76 | 12.02 |
| CDY38325 | Canola | cytosol | 14.62 | 9.97 |
| CDY64658 | Canola | cytosol | 13.44 | 9.97 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 11.07 | 8.81 |
| CDY10103 | Canola | extracellular | 7.51 | 7.06 |
Protein Annotations
| EnsemblPlants:CDY33739 | EnsemblPlantsGene:GSBRNA2T00055151001 | Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF121 | PFAM:PF00650 |
| PFscan:PS50191 | ProteinID:CDY33739 | ProteinID:CDY33739.1 | SMART:SM00516 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| UniParc:UPI0004EE7862 | UniProt:A0A078H8C3 | MapMan:35.2 | : | : | : |
Description
BnaA09g45450DBnaA09g45450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8C3]
Coordinates
chrLK032321:+:83066..84483
Molecular Weight (calculated)
28690.8 Da
IEP (calculated)
8.067
GRAVY (calculated)
-0.236
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MEENQELALT QFRKSVEKLS SSTEGYEAPT LMRFLVARSM NPDKAAKMFV DWQKWRASLV PPNGITDSEV KDELDFRKVC LQGPTKSGHP MVLVITSKHF
101: PAKDHVIFKK FVVHVLDKTI ASGIKGKEVG DEKLVAVIDL SNITYKNLDA RGLITGFQFL QSYYPERLAK CYILHMPGFF LTVWRFVCRF LDKATKEKIV
201: IVTDGEEERK FKEEIGVDAL PEEYGGSAKL TLIQDVLLPQ TSPQMLTTNN NNV
101: PAKDHVIFKK FVVHVLDKTI ASGIKGKEVG DEKLVAVIDL SNITYKNLDA RGLITGFQFL QSYYPERLAK CYILHMPGFF LTVWRFVCRF LDKATKEKIV
201: IVTDGEEERK FKEEIGVDAL PEEYGGSAKL TLIQDVLLPQ TSPQMLTTNN NNV
001: MEESQELALT QLRKSVEKLS SSTEGYDKPT LMRFLVARSM DPVKAAKMFV DWQKWRASMV PPTGFIPESE VQDELEFRKV CLQGPTKSGH PLVLVITSKH
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
101: FASKDPANFK KFVVYALDKT IASGNNGKEV GGEKLVAVID LANITYKNLD ARGLITGFQF LQSYYPERLA KCYILHMPGF FVTVWKFVCR FLEKATQEKI
201: VIVTDGEEQR KFEEEIGADA LPEEYGGRAK LTAIQDVLLP QAAPVTLTNN NV
Arabidopsis Description
AT1G14820 protein [Source:UniProtKB/TrEMBL;Acc:B9DGS8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.