Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010566.1-P | Field mustard | cytosol | 98.29 | 98.29 |
| CDY24776 | Canola | cytosol | 98.29 | 98.29 |
| CDY65854 | Canola | nucleus | 84.3 | 85.47 |
| AT4G36640.3 | Thale cress | cytosol | 85.67 | 85.37 |
| CDX72592 | Canola | cytosol | 82.25 | 83.39 |
| CDY42697 | Canola | cytosol | 81.91 | 83.05 |
| CDX75583 | Canola | cytosol | 40.96 | 76.43 |
| VIT_04s0023g01720.t01 | Wine grape | cytosol, mitochondrion | 68.6 | 69.31 |
| Solyc02g085300.2.1 | Tomato | cytosol | 49.49 | 67.13 |
| KRH08288 | Soybean | cytosol | 66.55 | 65.88 |
| KRH69927 | Soybean | cytosol | 66.55 | 65.88 |
| PGSC0003DMT400038571 | Potato | cytosol | 60.07 | 65.67 |
| GSMUA_AchrUn_... | Banana | cytosol | 59.39 | 61.05 |
| CDX73146 | Canola | cytosol | 59.39 | 60.21 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 54.61 | 57.14 |
| CDY38239 | Canola | cytosol | 12.29 | 57.14 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 55.63 | 54.88 |
| KXG37682 | Sorghum | cytosol | 52.56 | 52.56 |
| Zm00001d033836_P001 | Maize | nucleus | 52.56 | 52.2 |
| EER93541 | Sorghum | cytosol | 52.22 | 51.52 |
| Os03t0724100-01 | Rice | cytosol | 51.54 | 50.5 |
| HORVU4Hr1G074380.1 | Barley | cytosol | 23.89 | 50.36 |
| HORVU4Hr1G009210.2 | Barley | cytosol | 49.83 | 50.0 |
| TraesCS4A01G259700.1 | Wheat | cytosol | 49.49 | 49.66 |
| TraesCS4D01G055200.1 | Wheat | cytosol | 49.49 | 49.66 |
| KXG37681 | Sorghum | cytosol | 52.22 | 49.51 |
| TraesCS4A01G259600.1 | Wheat | cytosol | 49.15 | 49.32 |
| TraesCS4D01G055300.1 | Wheat | cytosol | 48.81 | 48.97 |
| TraesCS4B01G055000.1 | Wheat | cytosol | 48.81 | 48.97 |
| TraesCS4B01G055200.1 | Wheat | cytosol | 48.46 | 48.63 |
| TraesCS4A01G259500.1 | Wheat | cytosol | 48.46 | 48.63 |
| HORVU4Hr1G005090.2 | Barley | cytosol | 21.5 | 48.46 |
| HORVU4Hr1G009310.1 | Barley | cytosol | 48.12 | 48.29 |
| TraesCS4D01G055400.1 | Wheat | cytosol | 47.78 | 47.95 |
| TraesCS4B01G055100.1 | Wheat | cytosol | 46.08 | 47.7 |
| HORVU4Hr1G009190.1 | Barley | cytosol | 47.44 | 47.6 |
| HORVU6Hr1G021650.1 | Barley | cytosol, mitochondrion, nucleus | 22.53 | 47.48 |
| TraesCS4D01G055100.1 | Wheat | cytosol | 33.79 | 47.37 |
| TraesCS7B01G089700.1 | Wheat | cytosol | 45.39 | 47.0 |
| HORVU5Hr1G114590.3 | Barley | mitochondrion | 19.11 | 45.9 |
| CDY45413 | Canola | cytosol | 59.73 | 45.45 |
| HORVU3Hr1G080050.1 | Barley | cytosol, mitochondrion, plastid | 23.21 | 43.59 |
| HORVU5Hr1G020290.3 | Barley | plastid | 22.18 | 42.48 |
| CDY56380 | Canola | cytosol | 44.03 | 42.3 |
| CDY00428 | Canola | cytosol | 43.69 | 41.97 |
| Zm00001d033837_P001 | Maize | plastid | 41.64 | 40.94 |
| CDX90694 | Canola | cytosol | 43.0 | 40.78 |
| CDY05023 | Canola | cytosol | 42.66 | 39.81 |
| CDY21345 | Canola | cytosol | 43.34 | 39.44 |
| CDY12289 | Canola | cytosol | 25.26 | 35.07 |
| CDY38240 | Canola | peroxisome | 15.7 | 31.72 |
| CDX90047 | Canola | cytosol | 22.18 | 25.49 |
| CDY15164 | Canola | cytosol | 21.5 | 24.71 |
| CDY33738 | Canola | cytosol | 20.48 | 24.59 |
| CDX81674 | Canola | cytosol | 20.14 | 24.18 |
| CDY38020 | Canola | cytosol | 21.5 | 24.05 |
| CDY45292 | Canola | cytosol | 19.45 | 23.27 |
| CDY51766 | Canola | cytosol | 19.11 | 22.86 |
| CDY33739 | Canola | cytosol | 19.11 | 22.13 |
| CDY16746 | Canola | plastid | 19.11 | 22.05 |
| CDX87279 | Canola | plastid | 19.11 | 22.05 |
| CDX81673 | Canola | endoplasmic reticulum, golgi | 19.11 | 18.42 |
| CDY10026 | Canola | cytosol | 21.16 | 14.9 |
| CDY59787 | Canola | cytosol | 20.82 | 14.66 |
| CDX81672 | Canola | cytosol | 18.43 | 14.06 |
| CDY10638 | Canola | nucleus | 16.72 | 13.03 |
| CDY38325 | Canola | cytosol | 15.36 | 12.13 |
| CDY64658 | Canola | cytosol | 13.99 | 12.02 |
| CDY71148 | Canola | cytosol, mitochondrion, nucleus, plastid | 9.9 | 9.12 |
| CDY10103 | Canola | extracellular | 8.19 | 8.92 |
Protein Annotations
| EnsemblPlants:CDY35466 | EnsemblPlantsGene:GSBRNA2T00058485001 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF206 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | ProteinID:CDY35466 | ProteinID:CDY35466.1 | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0004EAC92B | UniProt:A0A078HCI4 | MapMan:35.2 | : |
Description
BnaC03g61940DBnaC03g61940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCI4]
Coordinates
chrLK032352:-:303172..304714
Molecular Weight (calculated)
33721.1 Da
IEP (calculated)
7.655
GRAVY (calculated)
-0.577
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MFKRRNAHQL DDGSQHDNKV RELRSAIEPL SGQSLVFCSD ASLRRYLAAR NWNVEKAKKM LEETLKWRST YKPQEIRWNQ VAHEGETGKV SRASFHDRQG
101: RVVLIMRPAL QNSTSAEGNI KHLVYLLENA ILNLPKGQEQ MSWLIDFTGW SMAANVPMKT TREIVYILQN HYPERLGIAF LYNPPRLFQA VYRAVQYFLD
201: PCTAQKVKFV YPKDKTSDEL MISHFDVENL PKEFGGEATL EYDHEEFSKQ MCEDDVKTAK FWGLEEKQYP KPNGFSPADV VLEPANSLAS AAS
101: RVVLIMRPAL QNSTSAEGNI KHLVYLLENA ILNLPKGQEQ MSWLIDFTGW SMAANVPMKT TREIVYILQN HYPERLGIAF LYNPPRLFQA VYRAVQYFLD
201: PCTAQKVKFV YPKDKTSDEL MISHFDVENL PKEFGGEATL EYDHEEFSKQ MCEDDVKTAK FWGLEEKQYP KPNGFSPADV VLEPANSLAS AAS
001: MFRRRNAHQL DNDDSQQDNK VRELKSAIGP LSGHSLVFCS DASLRRFLDA RNWDVEKAKK MIQETLKWRS TYKPQEIRWN QVAHEGETGK ASRASFHDRQ
101: GRVVLIMRPA MQNSTSQEGN IRHLVYLLEN AIINLPKGQK QMSWLIDFTG WSMAVNPPMK TTREIIHILQ NYYPERLGIA FLYNPPRLFQ AVYRAAKYFL
201: DPRTAEKVKF VYPKDKASDE LMTTHFDVEN LPKEFGGEAT LEYDHEDFSR QMYEDDLKTA KYWGLEGKHY PKTNGFSPSD VVPEPAIEIA SAAS
101: GRVVLIMRPA MQNSTSQEGN IRHLVYLLEN AIINLPKGQK QMSWLIDFTG WSMAVNPPMK TTREIIHILQ NYYPERLGIA FLYNPPRLFQ AVYRAAKYFL
201: DPRTAEKVKF VYPKDKASDE LMTTHFDVEN LPKEFGGEAT LEYDHEDFSR QMYEDDLKTA KYWGLEGKHY PKTNGFSPSD VVPEPAIEIA SAAS
Arabidopsis Description
At4g36640 [Source:UniProtKB/TrEMBL;Acc:O23217]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.