Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G055400.1 | Wheat | cytosol | 92.81 | 92.81 |
| TraesCS4A01G259500.1 | Wheat | cytosol | 92.12 | 92.12 |
| HORVU4Hr1G009310.1 | Barley | cytosol | 90.07 | 90.07 |
| TraesCS4B01G055100.1 | Wheat | cytosol | 81.51 | 84.1 |
| TraesCS4B01G055000.1 | Wheat | cytosol | 80.48 | 80.48 |
| TraesCS7B01G089700.1 | Wheat | cytosol | 77.05 | 79.51 |
| EER93541 | Sorghum | cytosol | 71.92 | 70.71 |
| Os03t0724100-01 | Rice | cytosol | 71.23 | 69.57 |
| Zm00001d033836_P001 | Maize | nucleus | 66.44 | 65.76 |
| KXG37682 | Sorghum | cytosol | 65.41 | 65.19 |
| KXG37681 | Sorghum | cytosol | 64.73 | 61.16 |
| Zm00001d033837_P001 | Maize | plastid | 59.93 | 58.72 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.79 | 56.14 |
| GSMUA_Achr4P03190_001 | Banana | cytosol | 53.42 | 55.71 |
| VIT_04s0023g01720.t01 | Wine grape | cytosol, mitochondrion | 53.77 | 54.14 |
| PGSC0003DMT400038571 | Potato | cytosol | 47.95 | 52.24 |
| GSMUA_Achr8P26360_001 | Banana | cytosol | 52.4 | 51.52 |
| KRH15219 | Soybean | cytosol | 50.34 | 51.4 |
| KRH51858 | Soybean | nucleus, plastid | 35.27 | 50.74 |
| Solyc02g085300.2.1 | Tomato | cytosol | 36.99 | 50.0 |
| KRH08288 | Soybean | cytosol | 50.34 | 49.66 |
| KRH69927 | Soybean | cytosol | 50.34 | 49.66 |
| KRH05807 | Soybean | cytosol | 49.66 | 49.49 |
| CDX73146 | Canola | cytosol | 48.97 | 49.48 |
| AT1G75170.1 | Thale cress | cytosol | 50.0 | 49.32 |
| KRH61179 | Soybean | cytosol | 30.48 | 49.17 |
| CDY24776 | Canola | cytosol | 49.32 | 49.15 |
| Bra010566.1-P | Field mustard | cytosol | 49.32 | 49.15 |
| Solyc12g089130.1.1 | Tomato | cytosol | 39.04 | 48.93 |
| Bra011696.1-P | Field mustard | nucleus | 48.29 | 48.62 |
| CDY35466 | Canola | cytosol | 48.63 | 48.46 |
| PGSC0003DMT400013200 | Potato | cytosol | 47.6 | 48.43 |
| CDY65854 | Canola | nucleus | 46.92 | 47.4 |
| Solyc04g080290.2.1 | Tomato | cytosol | 46.58 | 47.39 |
| CDY42697 | Canola | cytosol | 46.23 | 46.71 |
| CDX72592 | Canola | cytosol | 46.23 | 46.71 |
| VIT_18s0001g12420.t01 | Wine grape | cytosol | 50.34 | 46.67 |
| AT4G36640.3 | Thale cress | cytosol | 46.92 | 46.6 |
| Bra017768.1-P | Field mustard | cytosol | 45.89 | 46.37 |
| CDX75583 | Canola | cytosol | 23.29 | 43.31 |
| Bra015863.1-P | Field mustard | cytosol | 49.32 | 37.5 |
| CDY45413 | Canola | cytosol | 49.32 | 37.4 |
| TraesCS3B01G211200.1 | Wheat | nucleus | 37.67 | 36.42 |
| TraesCS3B01G500500.1 | Wheat | cytosol, nucleus, plastid | 31.16 | 32.62 |
| TraesCS3B01G502500.1 | Wheat | cytosol, nucleus, plastid | 30.82 | 32.26 |
| TraesCS6B01G331400.1 | Wheat | nucleus | 39.73 | 28.78 |
| TraesCS5B01G552300.1 | Wheat | cytosol | 22.95 | 27.69 |
| TraesCS3B01G475000.1 | Wheat | cytosol | 22.95 | 27.24 |
| TraesCS5B01G552100.1 | Wheat | cytosol | 21.92 | 26.45 |
| TraesCS5B01G552400.1 | Wheat | cytosol | 21.92 | 26.12 |
| TraesCS3B01G475100.1 | Wheat | cytosol | 20.89 | 25.52 |
| TraesCS5B01G451100.1 | Wheat | cytosol | 21.58 | 25.2 |
| TraesCS5B01G552200.1 | Wheat | cytosol | 21.92 | 25.1 |
| TraesCS5B01G551900.1 | Wheat | cytosol | 21.58 | 24.71 |
| TraesCS7B01G361800.2 | Wheat | mitochondrion, plastid | 17.81 | 16.99 |
| TraesCS4B01G243300.1 | Wheat | cytosol | 22.6 | 14.6 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G055200.1 | EnsemblPlantsGene:TraesCS4B01G055200 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF206 | PFAM:PF00650 |
| PFAM:PF03765 | PFscan:PS50191 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| TIGR:cd00170 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:43762580..43767998
Molecular Weight (calculated)
33534.8 Da
IEP (calculated)
9.169
GRAVY (calculated)
-0.621
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MFWRKQASHF DLDDVEQRQA KIKELRAALG PLSTRGEKYC SEACLVRYLE ARNWNVDNSR KMLEESLKWR AARRPEDIRW LDVSVEAETG KMYRAPFTDR
101: EGRTVIVMRP AKQNTSSHEG QLQYLTYTLE NAVLNLPQGQ DKMVLLIDFT GWTLAHRSPF KTSRESMTTV QSHYPERLSA AFMFNPPKIF EASFKVLKVL
201: IDPKSAQKLN FVYKENEESM KTMYNHIDPE VLPVEFGGKN NVVYNHEDYS KLMTKDDIKT ASFWGADSNH ATNGHSVPAV KSQSSLTVAK AS
101: EGRTVIVMRP AKQNTSSHEG QLQYLTYTLE NAVLNLPQGQ DKMVLLIDFT GWTLAHRSPF KTSRESMTTV QSHYPERLSA AFMFNPPKIF EASFKVLKVL
201: IDPKSAQKLN FVYKENEESM KTMYNHIDPE VLPVEFGGKN NVVYNHEDYS KLMTKDDIKT ASFWGADSNH ATNGHSVPAV KSQSSLTVAK AS
001: MNSDSNKSSS NGFEKSLTPE EYLNKINEVR TLLGPLTEKS SEFCSDAAIT RYLAARNGHV KKATKMLKET LKWRAQYKPE EIRWEEIARE AETGKIYRAN
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
101: CTDKYGRTVL VMRPSCQNTK SYKGQIRILV YCMENAILNL PDNQEQMVWL IDFHGFNMSH ISLKVSRETA HVLQEHYPER LGLAIVYNPP KIFESFYKMV
201: KPFLEPKTSN KVKFVYSDDN LSNKLLEDLF DMEQLEVAFG GKNSDAGFNF EKYAERMRED DLKFYGNTTV SSTSAHLTNS DSEVSDSEMK YLEDKEDETI
301: ENGTLQSPLD TTKT
Arabidopsis Description
F16L1.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LM14]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.