Factsheet for Bra017768.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72592	Canola	cytosol	98.27	98.27
CDY42697	Canola	cytosol	97.92	97.92
Bra011696.1-P	Field mustard	nucleus	84.78	84.48
Bra010566.1-P	Field mustard	cytosol	84.08	82.94
Solyc02g085300.2.1	Tomato	cytosol	51.21	68.52
VIT_04s0023g01720.t01	Wine grape	cytosol, mitochondrion	67.47	67.24
PGSC0003DMT400038571	Potato	cytosol	61.59	66.42
KRH08288	Soybean	cytosol	67.13	65.54
KRH69927	Soybean	cytosol	67.13	65.54
GSMUA_AchrUn_...	Banana	cytosol	57.79	58.6
GSMUA_Achr4P03190_001	Banana	cytosol	52.94	54.64
GSMUA_Achr8P26360_001	Banana	cytosol	55.36	53.87
EER93541	Sorghum	cytosol	51.56	50.17
KXG37682	Sorghum	cytosol	50.52	49.83
Zm00001d033836_P001	Maize	nucleus	50.52	49.49
TraesCS4D01G055100.1	Wheat	cytosol	34.95	48.33
TraesCS4A01G259700.1	Wheat	cytosol	48.79	48.29
HORVU4Hr1G009210.2	Barley	cytosol	48.79	48.29
TraesCS4D01G055200.1	Wheat	cytosol	48.79	48.29
KXG37681	Sorghum	cytosol	51.21	47.9
Os03t0724100-01	Rice	cytosol	49.48	47.83
TraesCS4B01G055000.1	Wheat	cytosol	48.1	47.6
TraesCS4A01G259600.1	Wheat	cytosol	47.06	46.58
TraesCS4A01G259500.1	Wheat	cytosol	46.71	46.23
TraesCS4D01G055400.1	Wheat	cytosol	46.71	46.23
TraesCS4D01G055300.1	Wheat	cytosol	46.71	46.23
TraesCS4B01G055200.1	Wheat	cytosol	46.37	45.89
TraesCS4B01G055100.1	Wheat	cytosol	44.64	45.58
HORVU4Hr1G074380.1	Barley	cytosol	21.8	45.32
HORVU4Hr1G009310.1	Barley	cytosol	45.33	44.86
HORVU4Hr1G009190.1	Barley	cytosol	44.98	44.52
Bra015863.1-P	Field mustard	cytosol	58.48	44.01
HORVU4Hr1G005090.2	Barley	cytosol	19.72	43.85
TraesCS7B01G089700.1	Wheat	cytosol	42.91	43.82
HORVU6Hr1G021650.1	Barley	cytosol, mitochondrion, nucleus	20.42	42.45
HORVU5Hr1G114590.3	Barley	mitochondrion	17.3	40.98
Bra012311.1-P	Field mustard	cytosol	43.25	40.98
Zm00001d033837_P001	Maize	plastid	41.52	40.27
HORVU3Hr1G080050.1	Barley	cytosol, mitochondrion, plastid	21.11	39.1
HORVU5Hr1G020290.3	Barley	plastid	20.07	37.91
Bra031370.1-P	Field mustard	cytosol	42.21	37.89
Bra000655.1-P	Field mustard	cytosol	40.48	37.86
Bra032645.1-P	Field mustard	cytosol	20.42	25.54
Bra033247.1-P	Field mustard	cytosol	21.11	23.92
Bra026802.1-P	Field mustard	cytosol	16.61	23.19
Bra026185.1-P	Field mustard	cytosol	19.03	22.45
Bra035864.1-P	Field mustard	plastid	19.38	22.05
Bra026803.1-P	Field mustard	cytosol	18.69	21.26
Bra032465.1-P	Field mustard	cytosol	20.42	14.18
Bra023828.1-P	Field mustard	nucleus	19.38	13.83
Bra015421.1-P	Field mustard	cytosol	18.69	13.43
Bra039949.1-P	Field mustard	cytosol	18.34	13.22

Protein Annotations

EnsemblPlants:Bra017768.1	EnsemblPlants:Bra017768.1-P	EnsemblPlantsGene:Bra017768	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF206
PFAM:PF00650	PFscan:PS50191	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
UniParc:UPI0002540C51	UniProt:M4DMN3	MapMan:35.2	:	:	:

Description

AT4G36640 (E=1e-140) | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

Coordinates

chrA03:-:30336951..30338159

Molecular Weight (calculated)

33117.0 Da

IEP (calculated)

6.184

GRAVY (calculated)

-0.638

Length

289 amino acids

Sequence
(BLAST)

001: MSAHQLEDDS QQDNKVSKLK SALGPLSGHS LVFCSDASLR RYLDARSWNV ENAKQMIEDT LKWRSTYKPH EIPWHEVAHE GETGKVSRAG FHDRQGRTVL
101: IMRPGLQNTT SAEGNIRHLV YLLENAIINL PKGQEQMSWL IDFTGWSMAN NAPMKTTRDI IYILQNHYPE RLGMSFLYNP PRLFQAGYKA VKYFLDPRTA
201: QKVNFVYPND KASDELMRSH FDMENLPKEF GGEATLEYDH EEFSRQMFED DLKTAKFWGL EEKQYPIPNG FSPADVVPEP ATSLASVAN

Best Arabidopsis Sequence Match ( AT4G36640.3 )
(BLAST)

001: MFRRRNAHQL DNDDSQQDNK VRELKSAIGP LSGHSLVFCS DASLRRFLDA RNWDVEKAKK MIQETLKWRS TYKPQEIRWN QVAHEGETGK ASRASFHDRQ
101: GRVVLIMRPA MQNSTSQEGN IRHLVYLLEN AIINLPKGQK QMSWLIDFTG WSMAVNPPMK TTREIIHILQ NYYPERLGIA FLYNPPRLFQ AVYRAAKYFL
201: DPRTAEKVKF VYPKDKASDE LMTTHFDVEN LPKEFGGEAT LEYDHEDFSR QMYEDDLKTA KYWGLEGKHY PKTNGFSPSD VVPEPAIEIA SAAS

Arabidopsis Description

At4g36640 [Source:UniProtKB/TrEMBL;Acc:O23217]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.