Factsheet for TraesCS4B01G055000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G259700.1	Wheat	cytosol	96.92	96.92
HORVU4Hr1G074380.1	Barley	cytosol	43.49	91.37
TraesCS4D01G055100.1	Wheat	cytosol	64.38	89.95
TraesCS4B01G055100.1	Wheat	cytosol	82.19	84.81
HORVU4Hr1G005090.2	Barley	cytosol	36.64	82.31
HORVU6Hr1G021650.1	Barley	cytosol, mitochondrion, nucleus	38.7	81.3
TraesCS4B01G055200.1	Wheat	cytosol	80.48	80.48
HORVU5Hr1G114590.3	Barley	mitochondrion	33.22	79.51
TraesCS7B01G089700.1	Wheat	cytosol	76.71	79.15
EER93541	Sorghum	cytosol	77.4	76.09
Os03t0724100-01	Rice	cytosol	77.4	75.59
HORVU3Hr1G080050.1	Barley	cytosol, mitochondrion, plastid	39.38	73.72
HORVU5Hr1G020290.3	Barley	plastid	38.01	72.55
KXG37682	Sorghum	cytosol	72.26	72.01
Zm00001d033836_P001	Maize	nucleus	72.6	71.86
KXG37681	Sorghum	cytosol	72.26	68.28
Zm00001d033837_P001	Maize	plastid	63.01	61.74
GSMUA_Achr4P03190_001	Banana	cytosol	57.53	60.0
GSMUA_AchrUn_...	Banana	cytosol	58.22	59.65
VIT_04s0023g01720.t01	Wine grape	cytosol, mitochondrion	56.16	56.55
PGSC0003DMT400038571	Potato	cytosol	50.68	55.22
KRH15219	Soybean	cytosol	53.42	54.55
Solyc02g085300.2.1	Tomato	cytosol	39.73	53.7
Solyc12g089130.1.1	Tomato	cytosol	42.81	53.65
KRH05807	Soybean	cytosol	52.74	52.56
GSMUA_Achr8P26360_001	Banana	cytosol	53.42	52.53
KRH61179	Soybean	cytosol	32.53	52.49
AT1G75170.1	Thale cress	cytosol	53.08	52.36
CDX73146	Canola	cytosol	51.71	52.25
KRH51858	Soybean	nucleus, plastid	36.3	52.22
KRH08288	Soybean	cytosol	51.71	51.01
PGSC0003DMT400013200	Potato	cytosol	50.0	50.87
KRH69927	Soybean	cytosol	51.37	50.68
CDY24776	Canola	cytosol	50.0	49.83
Bra010566.1-P	Field mustard	cytosol	50.0	49.83
Solyc04g080290.2.1	Tomato	cytosol	48.97	49.83
Bra011696.1-P	Field mustard	nucleus	48.97	49.31
VIT_18s0001g12420.t01	Wine grape	cytosol	53.08	49.21
CDY35466	Canola	cytosol	48.97	48.81
CDY42697	Canola	cytosol	47.95	48.44
CDY65854	Canola	nucleus	47.6	48.1
Bra017768.1-P	Field mustard	cytosol	47.6	48.1
CDX72592	Canola	cytosol	47.6	48.1
AT4G36640.3	Thale cress	cytosol	47.95	47.62
CDX75583	Canola	cytosol	22.95	42.68
Bra015863.1-P	Field mustard	cytosol	52.05	39.58
CDY45413	Canola	cytosol	52.05	39.48
TraesCS3B01G211200.1	Wheat	nucleus	39.04	37.75
TraesCS3B01G500500.1	Wheat	cytosol, nucleus, plastid	31.85	33.33
TraesCS3B01G502500.1	Wheat	cytosol, nucleus, plastid	31.85	33.33
TraesCS6B01G331400.1	Wheat	nucleus	41.1	29.78
TraesCS5B01G552100.1	Wheat	cytosol	23.29	28.1
TraesCS5B01G552300.1	Wheat	cytosol	23.29	28.1
TraesCS5B01G552400.1	Wheat	cytosol	23.29	27.76
TraesCS5B01G451100.1	Wheat	cytosol	23.29	27.2
TraesCS5B01G552200.1	Wheat	cytosol	22.95	26.27
TraesCS3B01G475100.1	Wheat	cytosol	21.23	25.94
TraesCS5B01G551900.1	Wheat	cytosol	22.26	25.49
TraesCS3B01G475000.1	Wheat	cytosol	21.23	25.2
TraesCS7B01G361800.2	Wheat	mitochondrion, plastid	17.12	16.34
TraesCS4B01G243300.1	Wheat	cytosol	23.63	15.27

Protein Annotations

EnsemblPlants:TraesCS4B01G055000.1	EnsemblPlantsGene:TraesCS4B01G055000	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom
InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR10174	PANTHER:PTHR10174:SF206	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	PRINTS:PR00180	SEG:seg	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	TIGR:cd00170	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr4B:+:43750714..43752787

Molecular Weight (calculated)

33344.8 Da

IEP (calculated)

9.367

GRAVY (calculated)

-0.486

Length

292 amino acids

Sequence
(BLAST)

001: MFRRKHASHF NSDDAEQRQA KINELRAALG SMSARGEKYC SEACLARYLE ARNWNIDKSR KMLEESLKWR AVSRPEDIRW PDVSVEAETG KMYRATFTDR
101: EGRTVVIMRP AKQNTSSHEG QLRYLIYTLE NAVLSLPQGL DKMVWLIDFT GWTLANATPI KTARDSANIL QNHYPERLSV AFLFNPPKVF EAFFKVVKVF
201: LDPKSIQKVN FVYKDNEESM KTMYKHIDPE VLPVEFGGKN IVVYNHEDYS KLMTKDDIKT TSFWAADGSH AVNGGSVPQV IPQSSPIVAK AS

Best Arabidopsis Sequence Match ( AT1G75170.1 )
(BLAST)

001: MFRWKNSSQT EQEQKEAALR EAKMKELKTL IGQLSGRNSL YCSDACLKRY LEARNWNVGK AKKMLEETLK WRSSFKPEEI RWNEVSGEGE TGKVYKAGFH
101: DRHGRTVLIL RPGLQNTKSL ENQMKHLVYL IENAILNLPE DQEQMSWLID FTGWSMSTSV PIKSARETIN ILQNHYPERL AVAFLYNPPR LFEAFWKIVK
201: YFIDAKTFVK VKFVYPKNSE SVELMSTFFD EENLPTEFGG KALLQYNYEE FSKQMNQDDV KTANFWGLGH SNNNQLHASN GFSGAEIAPE PIQNHP

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:Q9FRK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.