Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G552300.1 | Wheat | cytosol | 87.45 | 92.15 |
| HORVU5Hr1G121940.5 | Barley | cytosol | 89.02 | 91.16 |
| TraesCS5B01G552100.1 | Wheat | cytosol | 75.29 | 79.34 |
| TraesCS5B01G552400.1 | Wheat | cytosol | 72.16 | 75.1 |
| TraesCS5B01G451100.1 | Wheat | cytosol | 68.63 | 70.0 |
| TraesCS5B01G551900.1 | Wheat | cytosol | 68.63 | 68.63 |
| EER90511 | Sorghum | cytosol | 62.35 | 63.6 |
| Os03t0850700-01 | Rice | cytosol | 63.92 | 62.45 |
| Zm00001d012847_P001 | Maize | cytosol | 60.78 | 56.16 |
| TraesCS3B01G475000.1 | Wheat | cytosol | 49.41 | 51.22 |
| TraesCS3B01G475100.1 | Wheat | cytosol | 47.84 | 51.05 |
| VIT_01s0150g00170.t01 | Wine grape | cytosol | 46.67 | 48.37 |
| Bra032645.1-P | Field mustard | cytosol | 43.14 | 47.62 |
| VIT_17s0000g00130.t01 | Wine grape | cytosol | 47.45 | 47.27 |
| GSMUA_Achr4P15920_001 | Banana | cytosol | 48.63 | 47.15 |
| CDX90047 | Canola | cytosol | 45.88 | 45.88 |
| Bra033247.1-P | Field mustard | cytosol | 45.88 | 45.88 |
| AT1G01630.1 | Thale cress | cytosol | 45.49 | 45.49 |
| CDY15164 | Canola | cytosol | 45.1 | 45.1 |
| KRH41051 | Soybean | cytosol | 43.53 | 44.76 |
| Solyc03g118150.2.1 | Tomato | cytosol | 47.45 | 44.65 |
| PGSC0003DMT400036745 | Potato | cytosol | 47.06 | 44.28 |
| KRH54081 | Soybean | cytosol | 45.49 | 43.77 |
| KRH63881 | Soybean | cytosol | 45.1 | 43.56 |
| CDY38020 | Canola | cytosol | 44.31 | 43.13 |
| Solyc06g068800.2.1 | Tomato | cytosol | 46.27 | 38.19 |
| PGSC0003DMT400065724 | Potato | cytosol | 46.27 | 38.19 |
| KRH59732 | Soybean | endoplasmic reticulum, golgi | 40.0 | 35.66 |
| TraesCS4B01G055000.1 | Wheat | cytosol | 26.27 | 22.95 |
| TraesCS3B01G211200.1 | Wheat | nucleus | 27.06 | 22.85 |
| TraesCS4B01G055200.1 | Wheat | cytosol | 25.1 | 21.92 |
| TraesCS4B01G055100.1 | Wheat | cytosol | 24.31 | 21.91 |
| TraesCS7B01G089700.1 | Wheat | cytosol | 23.14 | 20.85 |
| TraesCS3B01G502500.1 | Wheat | cytosol, nucleus, plastid | 22.35 | 20.43 |
| TraesCS3B01G500500.1 | Wheat | cytosol, nucleus, plastid | 21.96 | 20.07 |
| TraesCS7B01G361800.2 | Wheat | mitochondrion, plastid | 21.96 | 18.3 |
| TraesCS6B01G331400.1 | Wheat | nucleus | 24.31 | 15.38 |
| TraesCS4B01G243300.1 | Wheat | cytosol | 22.35 | 12.61 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G552200.1 | EnsemblPlantsGene:TraesCS5B01G552200 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR10174 | PANTHER:PTHR10174:SF158 | PFAM:PF00650 |
| PFscan:PS50191 | SEG:seg | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 |
| TIGR:cd00170 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:703168386..703169681
Molecular Weight (calculated)
29273.8 Da
IEP (calculated)
7.233
GRAVY (calculated)
-0.569
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCGTDERQY GHGGDGDAAE WKKVAELREV VEAQDPSAKE EDDFALRRFL RAREHNIKKA SAMLLRYLAW KRVTMPHGFI SDDEVRGEIA KGRDHHQGFD
101: RLGRPMSYLY GGCHFPVRGD HEDLKRYVAY AFEKSCTRLS AGQEKFAAVI DLKGWGYANC DMRGYLAGLD IMQSYYPERV GRVLLIHVPY IFMAAWKMVY
201: PFIDDKTKKK FVFVADRDLD ATLRDAIDES QLPEEYGGKL KFQAYNNFSP SSKSI
101: RLGRPMSYLY GGCHFPVRGD HEDLKRYVAY AFEKSCTRLS AGQEKFAAVI DLKGWGYANC DMRGYLAGLD IMQSYYPERV GRVLLIHVPY IFMAAWKMVY
201: PFIDDKTKKK FVFVADRDLD ATLRDAIDES QLPEEYGGKL KFQAYNNFSP SSKSI
001: MENKETKQEP AAAAEQKTVP LIEDEIERSK VGIMRALCDR QDPETKEVDD LMIRRFLRAR DLDIEKASTM FLNYLTWKRS MLPKGHIPEA EIANDLSHNK
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
101: MCMQGHDKMG RPIAVAIGNR HNPSKGNPDE FKRFVVYTLE KICARMPRGQ EKFVAIGDLQ GWGYSNCDIR GYLAALSTLQ DCYPERLGKL YIVHAPYIFM
201: TAWKVIYPFI DANTKKKIVF VENKKLTPTL LEDIDESQLP DIYGGKLPLV PIQET
Arabidopsis Description
Polyphosphoinositide binding protein, putative [Source:UniProtKB/TrEMBL;Acc:Q9LQ96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.